Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G326100 Theobroma cacao HOM05D009561 ORTHO05D016381 9.5e-92 340.1 166 100.0
Thecc.09G133300 Theobroma cacao HOM05D003107 ORTHO05D003092 1.1e-63 246.9 191 68.6
Duzib187G1951 Durio zibethinus HOM05D003107 ORTHO05D003092 5.3e-50 201.4 196 55.6
Gohir.D06G052900 Gossypium hirsutum HOM05D003107 ORTHO05D003092 3.2e-31 139.0 191 42.9
Gohir.A06G053600 Gossypium hirsutum HOM05D003107 ORTHO05D003092 5.5e-31 138.3 172 47.1
Gorai.010G061400 Gossypium raimondii HOM05D003107 ORTHO05D003092 1.6e-27 126.7 180 43.3
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 1.8e-21 106.7 186 36.6
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 7.4e-20 101.3 173 38.2
CiPaw.03G248900 Carya illinoinensis HOM05D003107 ORTHO05D003092 3.4e-17 92.4 156 41.0
vmacro07728 Vaccinium macrocarpon HOM05D003107 ORTHO05D003092 1.9e-15 86.7 177 34.5
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 2.5e-15 86.3 173 35.8
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 9.4e-15 84.3 173 33.5
GSVIVG01015600001 Vitis vinifera HOM05D009561 ORTHO05D003092 3.6e-14 82.4 186 32.8
CSS0017448 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 1.4e-13 80.5 171 36.8
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-13 80.5 181 32.0
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-13 80.5 181 32.0
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 2.0e-12 76.6 236 27.1
Haze_25496 Corylus avellana HOM05D009561 ORTHO05D003092 2.5e-12 76.3 178 34.8
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 7.4e-12 74.7 171 32.2
CSS0015137 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 9.7e-12 74.3 161 35.4
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 2.2e-11 73.2 178 31.5
Lalb_Chr08g0234601 Lupinus albus HOM05D003107 ORTHO05D003092 4.1e-10 68.9 180 29.4
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 1.3e-08 63.9 194 30.4
SHI29737 Sapria himalayana HOM05D014003 ORTHO05D016381 1.7e-08 63.5 110 36.4
Ciclev10007677m.g Citrus clementina HOM05D003107 ORTHO05D003092 5.0e-08 62.0 177 33.3
SHI33553 Sapria himalayana HOM05D014003 ORTHO05D016381 1.2e-06 57.4 112 33.9
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 1.6e-06 57.0 181 28.7
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 7.9e-06 54.7 190 26.8


User provided reference genes

Program Settings