Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G297300 Theobroma cacao HOM05D008014 ORTHO05D009981 0.0e+00 1248.4 788 100.0
Thecc.09G297200 Theobroma cacao HOM05D008014 ORTHO05D009981 1.7e-199 700.3 772 62.3
Thecc.09G297500 Theobroma cacao HOM05D008014 ORTHO05D009981 6.4e-138 495.7 808 47.6
Thecc.09G297600 Theobroma cacao HOM05D008014 ORTHO05D009981 5.3e-124 449.5 923 46.5
Duzib168G0242 Durio zibethinus HOM05D008014 ORTHO05D009981 4.8e-109 399.8 849 45.9
Duzib170G0545 Durio zibethinus HOM05D008014 ORTHO05D009981 7.8e-51 206.5 199 53.8
Gohir.A05G086400 Gossypium hirsutum HOM05D041197 ORTHO05D036119 4.0e-39 167.5 264 39.8
Duzib213G0359 Durio zibethinus HOM05D008014 ORTHO05D009981 8.9e-31 139.8 199 40.7
Duzib213G1088 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-29 136.0 198 39.4
Thecc.07G106000 Theobroma cacao HOM05D008014 ORTHO05D009981 8.3e-29 133.3 159 47.2
Duzib187G0568 Durio zibethinus HOM05D008014 ORTHO05D009981 1.9e-28 132.1 218 38.1
Gohir.A04G040100 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.1e-28 131.0 179 41.9
Gohir.A13G148400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.1e-28 131.0 216 40.3
Thecc.07G105600 Theobroma cacao HOM05D008014 ORTHO05D009981 5.4e-28 130.6 219 37.9
Duzib187G1296 Durio zibethinus HOM05D008014 ORTHO05D009981 7.1e-28 130.2 221 37.6
Gohir.A04G040200 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.2e-27 129.4 157 44.6
Gorai.009G369600 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.2e-27 129.4 179 40.8
Gohir.D05G343433 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.6e-27 127.5 179 41.3
Thecc.03G303400 Theobroma cacao HOM05D008014 ORTHO05D009981 6.0e-27 127.1 206 38.8
COL.COLO4_30081 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.0e-26 126.3 193 39.4
Duzib187G1720 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-26 125.9 206 38.8
Duzib187G1989 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-26 125.9 206 38.8
COL.COLO4_30083 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.7e-26 125.6 165 44.2
Gorai.009G371800 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.7e-26 125.6 195 39.5
Duzib187G1128 Durio zibethinus HOM05D008014 ORTHO05D009981 3.0e-26 124.8 168 42.9
Gohir.D13G153000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 6.6e-26 123.6 222 39.2
Gohir.A01G057332 Gossypium hirsutum HOM05D008014 ORTHO05D009981 8.6e-26 123.2 162 43.8
Gohir.A01G057600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.5e-25 121.7 160 41.9
Gohir.D05G342800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.5e-25 121.7 196 37.2
Gorai.013G172900 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.5e-25 121.7 224 38.8
Gohir.A01G057400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.3e-25 121.3 188 36.7
Gohir.D01G043800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 7.3e-25 120.2 233 32.6
Gorai.002G063000 Gossypium raimondii HOM05D008014 ORTHO05D009981 7.3e-25 120.2 233 32.6
Gorai.009G369400 Gossypium raimondii HOM05D008014 ORTHO05D009981 9.5e-25 119.8 196 36.7
Gohir.D05G342750 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.1e-23 116.3 196 36.7
Gorai.009G369100 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.1e-23 116.3 196 36.7
Thecc.03G304500 Theobroma cacao HOM05D008014 ORTHO05D009981 2.4e-23 115.2 173 39.9
Thecc.03G305000 Theobroma cacao HOM05D008014 ORTHO05D009981 2.4e-23 115.2 173 39.9
Gohir.D01G043732 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.0e-23 114.4 165 40.0
Gorai.002G062900 Gossypium raimondii HOM05D008014 ORTHO05D009981 4.0e-23 114.4 165 40.0
Gorai.009G369900 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.0e-22 112.1 157 41.4
COL.COLO4_10755 Corchorus olitorius HOM05D008014 ORTHO05D009981 2.6e-22 111.7 180 38.3
Gohir.A04G040400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 9.9e-22 109.8 210 35.2
Gorai.002G063200 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.2e-21 108.6 207 34.3
Thecc.03G303500 Theobroma cacao HOM05D008014 ORTHO05D009981 2.2e-21 108.6 211 36.5
Gohir.D01G044000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.8e-21 107.8 207 34.3
Thecc.03G303700 Theobroma cacao HOM05D008014 ORTHO05D009981 6.4e-21 107.1 198 39.4
Duzib205G1694 Durio zibethinus HOM05D008014 ORTHO05D009981 6.0e-19 100.5 137 42.3
Thecc.04G233100 Theobroma cacao HOM05D021021 ORTHO05D022794 8.6e-18 96.7 144 39.6
Gohir.D08G180600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.1e-17 96.3 176 39.2
COL.COLO4_10756 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.5e-17 95.9 166 39.8
COL.COLO4_17130 Corchorus olitorius HOM05D008014 ORTHO05D009981 3.3e-17 94.7 185 39.5
Gohir.A01G057500 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.3e-17 94.4 180 35.6
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 7.3e-17 93.6 166 36.7
Gohir.D01G043900 Gossypium hirsutum HOM05D008014 ORTHO05D047837 7.3e-17 93.6 180 35.0
Gorai.002G063100 Gossypium raimondii HOM05D008014 ORTHO05D047837 7.3e-17 93.6 180 35.0
Gohir.D08G180500 Gossypium hirsutum HOM05D013541 ORTHO05D009981 9.6e-17 93.2 147 40.1
Gohir.D08G180550 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.6e-16 92.4 134 42.5
Gohir.A08G160100 Gossypium hirsutum HOM05D013541 ORTHO05D009981 6.2e-16 90.5 147 39.5
Gohir.A08G160200 Gossypium hirsutum HOM05D013541 ORTHO05D009981 6.2e-16 90.5 147 39.5
Gorai.004G189300 Gossypium raimondii HOM05D013541 ORTHO05D009981 6.2e-16 90.5 165 38.8
Gorai.004G189100 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.1e-15 89.7 137 40.1
Gorai.004G189200 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.1e-15 89.7 122 42.6
Duzib213G0842 Durio zibethinus HOM05D008014 ORTHO05D009981 4.4e-14 84.3 165 32.7
Duzib205G1222 Durio zibethinus HOM05D008014 ORTHO05D009981 5.8e-14 84.0 169 36.7
vmacro16255 Vaccinium macrocarpon HOM05D000045 ORTHO05D002701 1.7e-10 72.4 180 31.7
Gohir.D05G087750 Gossypium hirsutum HOM05D041197 ORTHO05D036119 3.0e-10 71.6 225 31.1
Gorai.009G089800 Gossypium raimondii HOM05D041197 ORTHO05D036119 3.0e-10 71.6 225 31.1
COL.COLO4_36825 Corchorus olitorius HOM05D008014 ORTHO05D009981 6.6e-10 70.5 137 30.7
Gorai.005G043300 Gossypium raimondii HOM05D021021 ORTHO05D022794 1.1e-09 69.7 130 33.8
Gohir.D02G039200 Gossypium hirsutum HOM05D021021 ORTHO05D022794 3.3e-09 68.2 130 33.1
Gorai.005G043400 Gossypium raimondii HOM05D021021 ORTHO05D022794 3.3e-09 68.2 130 33.1
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 3.6e-08 64.7 146 26.0
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 1.4e-07 62.8 146 26.7
Gohir.A02G032500 Gossypium hirsutum HOM05D021021 ORTHO05D022794 3.1e-07 61.6 130 30.0
Gohir.D08G180666 Gossypium hirsutum HOM05D010401 ORTHO05D012682 4.0e-07 61.2 205 27.8
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.5e-06 59.3 195 22.6
Gohir.A11G320800 Gossypium hirsutum HOM05D009011 ORTHO05D036129 2.0e-06 58.9 118 33.1
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 4.5e-06 57.8 120 27.5
COL.COLO4_04986 Corchorus olitorius HOM05D015334 ORTHO05D001602 7.6e-06 57.0 123 30.9
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 7.6e-06 57.0 205 24.4
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 9.9e-06 56.6 241 23.2


User provided reference genes

Program Settings