Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G278700 Theobroma cacao HOM05D005386 ORTHO05D006981 1.0e-111 406.8 209 100.0
COL.COLO4_34005 Corchorus olitorius HOM05D005386 ORTHO05D006981 7.0e-68 261.2 191 74.3
Gohir.A05G079500 Gossypium hirsutum HOM05D005386 ORTHO05D006981 3.4e-62 242.3 229 60.7
Gorai.009G084000 Gossypium raimondii HOM05D005386 ORTHO05D006981 5.8e-62 241.5 191 69.6
Gohir.D05G082400 Gossypium hirsutum HOM05D005386 ORTHO05D006981 1.3e-61 240.4 191 69.1
Duzib168G0172 Durio zibethinus HOM05D005386 ORTHO05D006981 1.7e-61 240.0 192 71.9
QL01p011847 Quercus lobata HOM05D005386 ORTHO05D006981 5.2e-47 191.8 191 60.2
Cfa009987 Carpinus fangiana HOM05D005386 ORTHO05D006981 3.8e-45 185.7 191 56.0
GSVIVG01036080001 Vitis vinifera HOM05D005386 ORTHO05D006981 1.1e-44 184.1 193 56.5
Haze_23346 Corylus avellana HOM05D005386 ORTHO05D006981 2.4e-44 183.0 191 55.5
Ciclev10028837m.g Citrus clementina HOM05D005386 ORTHO05D006981 3.2e-44 182.6 191 55.5
Manes.04G001400 Manihot esculenta HOM05D005386 ORTHO05D006981 1.2e-43 180.6 188 53.7
Atru.chr3.3168 Acer truncatum HOM05D005386 ORTHO05D006981 8.1e-40 167.9 185 55.1
Eucgr.J00523 Eucalyptus grandis HOM05D005386 ORTHO05D006981 4.0e-39 165.6 181 53.0
Glyma.12G091900 Glycine max HOM05D005386 ORTHO05D006981 6.9e-39 164.9 174 52.3
CiPaw.14G098000 Carya illinoinensis HOM05D005386 ORTHO05D006981 2.6e-38 162.9 191 50.3
Glyma.11G181300 Glycine max HOM05D005386 ORTHO05D006981 1.7e-37 160.2 193 49.7
TWI31G0673 Tripterygium wilfordii HOM05D005386 ORTHO05D006981 1.7e-37 160.2 188 50.5
Potri.009G160500 Populus trichocarpa HOM05D005386 ORTHO05D006981 1.1e-36 157.5 194 51.0
Dinv08924 Davidia involucrata HOM05D005386 ORTHO05D006981 3.2e-36 156.0 201 46.8
TAR633G0448 Trochodendron aralioides HOM05D005386 ORTHO05D006981 5.4e-36 155.2 198 46.0
CANSAT54G1533 Cannabis sativa HOM05D005386 ORTHO05D006981 2.7e-35 152.9 201 48.3
Prupe.6G135900 Prunus persica HOM05D005386 ORTHO05D006981 3.5e-35 152.5 162 56.2
PGR119G1266 Punica granatum HOM05D005386 ORTHO05D006981 1.3e-34 150.6 191 48.7
Ca_19443_v3 Cicer arietinum L. HOM05D005386 ORTHO05D006981 5.1e-34 148.7 194 46.4
THA.LOC104810925 Tarenaya hassleriana HOM05D005386 ORTHO05D006981 1.1e-33 147.5 195 46.7
RcHm_v2.0_Chr5g0045261 Rosa chinensis HOM05D005386 ORTHO05D006981 1.5e-33 147.1 187 50.8
Lalb_Chr03g0028241 Lupinus albus HOM05D005386 ORTHO05D006981 2.5e-33 146.4 191 46.6
Phvul.011G096200 Phaseolus vulgaris HOM05D005386 ORTHO05D006981 4.3e-33 145.6 192 46.4
FvH4_2g14080 Fragaria vesca HOM05D005386 ORTHO05D006981 5.6e-33 145.2 175 52.6
Rhsim01G0203700 Rhododendron simsii HOM05D005386 ORTHO05D006981 5.6e-33 145.2 171 48.5
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 9.6e-33 144.4 174 47.1
Duzib170G0830 Durio zibethinus HOM05D005386 ORTHO05D006981 1.3e-32 144.1 136 61.8
FAN20G2771 Fragaria x ananassa HOM05D005386 ORTHO05D006981 2.8e-32 142.9 221 44.3
Aa31LG1G13200 Aethionema arabicum HOM05D005386 ORTHO05D006981 3.6e-32 142.5 196 49.0
Sed0024067 Sechium edule HOM05D005386 ORTHO05D006981 6.2e-32 141.7 194 47.9
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 8.1e-32 141.4 174 46.6
Thhalv10014124m.g Eutrema salsugineum HOM05D005386 ORTHO05D006981 1.1e-31 141.0 200 48.5
MD03G1149900 Malus domestica HOM05D005386 ORTHO05D006981 1.1e-31 141.0 177 46.9
Sp6g22900 Schrenkiella parvula HOM05D005386 ORTHO05D006981 1.1e-31 141.0 199 46.2
ClCG01G011810 Citrullus lanatus HOM05D005386 ORTHO05D006981 1.8e-31 140.2 198 46.0
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 2.4e-31 139.8 202 47.5
Medtr4g052500 Medicago truncatula HOM05D005386 ORTHO05D006981 2.4e-31 139.8 198 43.4
Psat7g187240 Pisum sativum HOM05D005386 ORTHO05D006981 2.4e-31 139.8 202 43.6
Hma1.2p1_0319F.1_g123920 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 5.3e-31 138.7 201 40.3
CsaV3_1G015030 Cucumis sativus L. HOM05D005386 ORTHO05D006981 9.0e-31 137.9 198 47.5
arahy.Tifrunner.gnm1.ann1.PADK5G Arachis hypogaea HOM05D005386 ORTHO05D006981 1.2e-30 137.5 196 46.9
MELO3C025590.2 Cucumis melo HOM05D005386 ORTHO05D006981 4.5e-30 135.6 204 45.6
MBI19_g34002_MAGBIO Magnolia biondii HOM05D005386 ORTHO05D006981 4.5e-30 135.6 184 46.2
BraA03t10382Z Brassica rapa HOM05D005386 ORTHO05D006981 5.8e-30 135.2 177 48.6
Nn7g37254 Nelumbo nucifera HOM05D005386 ORTHO05D006981 7.6e-30 134.8 184 43.5
Sc06g0008690 Simmondsia chinensis HOM05D005386 ORTHO05D006981 7.6e-30 134.8 169 45.0
Ah.01g001670 Amaranthus hybridus HOM05D005386 ORTHO05D006981 9.9e-30 134.4 161 44.1
VMungo1127G0965 Vigna mungo HOM05D005386 ORTHO05D006981 9.9e-30 134.4 143 51.0
A03p10700 Brassica napus HOM05D005386 ORTHO05D006981 1.3e-29 134.0 200 47.0
TPR.G17201 Trifolium pratense HOM05D005386 ORTHO05D006981 3.8e-29 132.5 192 44.3
AT5G22340 Arabidopsis thaliana HOM05D005386 ORTHO05D006981 8.4e-29 131.3 179 45.8
TAR633G2192 Trochodendron aralioides HOM05D005386 ORTHO05D006981 1.1e-28 131.0 187 42.8
BcaC01g06590 Brassica carinata HOM05D005386 ORTHO05D006981 4.2e-28 129.0 200 46.0
BolC3t13704H Brassica oleracea HOM05D005386 ORTHO05D006981 7.1e-28 128.3 202 46.5
Lj3g0020097 Lotus japonicus HOM05D005386 ORTHO05D006981 7.1e-28 128.3 204 43.6
AL6G33360 Arabidopsis lyrata HOM05D005386 ORTHO05D006981 1.2e-27 127.5 176 44.9
C03p12310 Brassica napus HOM05D005386 ORTHO05D006981 1.6e-27 127.1 202 46.0
Lj1A257T31 Lonicera japonica HOM05D005386 ORTHO05D006981 1.6e-27 127.1 136 50.0
Sopen11g027400 Solanum pennellii HOM05D005386 ORTHO05D006981 4.6e-27 125.6 186 42.5
AUR62017661 Chenopodium quinoa HOM05D005386 ORTHO05D006981 6.0e-27 125.2 123 47.2
DCAR_022894 Daucus carota HOM05D005386 ORTHO05D006981 7.9e-27 124.8 157 43.9
Carub.0006s2008 Capsella rubella HOM05D005386 ORTHO05D006981 1.8e-26 123.6 203 42.9
Solyc11g068680.2 Solanum lycopersicum HOM05D005386 ORTHO05D006981 1.8e-26 123.6 183 43.2
vmacro14339 Vaccinium macrocarpon HOM05D005386 ORTHO05D006981 3.0e-26 122.9 177 42.9
AUR62015198 Chenopodium quinoa HOM05D005386 ORTHO05D006981 3.9e-26 122.5 123 45.5
EL10Ac9g22916 Beta vulgaris HOM05D005386 ORTHO05D006981 3.3e-25 119.4 173 42.2
SalBow6G0611 Salvia bowleyana HOM05D005386 ORTHO05D006981 2.8e-24 116.3 176 43.8
Lsat_1_v5_gn_2_3840 Lactuca sativa HOM05D005386 ORTHO05D006981 3.7e-24 115.9 138 44.2
PSO339G6531 Papaver somniferum HOM05D005386 ORTHO05D006981 6.2e-24 115.2 175 40.0
Actinidia37072 Actinidia chinensis HOM05D005386 ORTHO05D006981 8.1e-24 114.8 165 41.8
BcaC01g06587 Brassica carinata HOM05D005386 ORTHO05D006981 3.1e-23 112.8 201 44.3
Cc01_g08820 Coffea canephora HOM05D005386 ORTHO05D006981 6.9e-23 111.7 166 42.8
FAN24G3375 Fragaria x ananassa HOM05D005386 ORTHO05D006981 6.9e-23 111.7 127 55.1
PSO384G1357 Papaver somniferum HOM05D005386 ORTHO05D006981 6.9e-23 111.7 184 38.0
ATR0307G012 Amborella trichopoda HOM05D005386 ORTHO05D006981 9.0e-23 111.3 188 38.3
BcaB01g04714 Brassica carinata HOM05D005386 ORTHO05D006981 1.5e-22 110.5 199 43.2
MSTRG.18771 Avicennia marina HOM05D005386 ORTHO05D006981 7.6e-22 108.2 163 39.9
Nitab4.5_0000731g0080 Nicotiana tabacum HOM05D005386 ORTHO05D006981 7.6e-22 108.2 176 42.6
Nitab4.5_0008177g0060 Nicotiana tabacum HOM05D005386 ORTHO05D006981 1.0e-21 107.8 176 42.0
Migut.D02364 Erythranthe guttata HOM05D005386 ORTHO05D006981 1.3e-21 107.5 200 38.5
SEGI_27763 Sequoiadendron giganteum HOM05D005386 ORTHO05D006981 1.3e-21 107.5 204 32.8
Peaxi162Scf00224g00218 Petunia axillaris HOM05D005386 ORTHO05D006981 1.7e-21 107.1 177 40.7
Hund18776 Selenicereus undatus HOM05D005386 ORTHO05D006981 6.5e-21 105.1 144 43.8
ECA238G0234 Erigeron canadensis HOM05D005386 ORTHO05D006981 1.4e-20 104.0 142 42.3
CARHR191200 Cardamine hirsuta HOM05D005386 ORTHO05D006981 2.5e-20 103.2 130 47.7
Cpa.g.sc195.26 Carica papaya HOM05D005386 ORTHO05D006981 1.8e-18 97.1 103 51.5
SGA_v2.0_scaffold7G04001 Striga asiatica HOM05D005386 ORTHO05D006981 3.0e-18 96.3 183 38.8
HPP92_001703 Vanilla planifolia HOM05D005386 ORTHO05D006981 3.9e-18 95.9 192 37.5
Os03g0322600 Oryza sativa ssp. japonica HOM05D005386 ORTHO05D006981 8.7e-18 94.7 170 35.9
HanXRQChr06g0183931 Helianthus annuus HOM05D005386 ORTHO05D006981 2.5e-17 93.2 138 39.9
Zm00001eb395560 Zea mays HOM05D005386 ORTHO05D006981 9.0e-15 84.7 172 33.1
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 1.0e-13 81.3 139 32.4
CDE08G0019 Ceratophyllum demersum HOM05D005386 ORTHO05D006981 1.9e-12 77.0 143 32.9
AagrBONN_evm.TU.Sc2ySwM_228.4159 Anthoceros agrestis HOM05D005386 ORTHO05D006981 3.0e-10 69.7 231 26.8
AUR62014970 Chenopodium quinoa HOM05D005386 ORTHO05D006981 6.7e-10 68.6 123 33.3
Ciclev10029903m.g Citrus clementina HOM05D005386 ORTHO05D006981 8.7e-10 68.2 51 64.7
unitig_736.g22394 Utricularia gibba HOM05D005386 ORTHO05D006981 8.7e-10 68.2 123 34.1
Aqoxy1G00008 Aquilegia oxysepala HOM05D005386 ORTHO05D006981 1.1e-09 67.8 148 30.4
Hma1.2p1_0319F.1_g123930 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 1.5e-09 67.4 115 35.7
Zm00001eb285540 Zea mays HOM05D005386 ORTHO05D006981 4.3e-09 65.9 117 33.3
SMO140G0002 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 2.8e-08 63.2 147 31.3
FAN24G0713 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.0e-05 54.7 31 80.6


User provided reference genes

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