Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 3.2e-53 211.5 105 100.0
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 2.2e-38 162.2 108 78.7
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.2e-30 135.6 107 70.1
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 6.5e-30 134.0 107 69.2
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 6.5e-30 134.0 107 69.2
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.2e-28 129.8 110 68.2
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 1.6e-20 102.8 92 59.8
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 1.6e-15 86.3 97 49.5
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 1.6e-15 86.3 93 53.8
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 5.9e-15 84.3 102 49.0
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 2.2e-14 82.4 85 58.8
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 5.0e-14 81.3 91 51.6
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 8.5e-14 80.5 109 51.4
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 3.2e-13 78.6 104 45.2
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 4.2e-13 78.2 106 46.2
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 7.2e-13 77.4 106 46.2
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 7.2e-13 77.4 93 48.4
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 9.5e-13 77.0 81 53.1
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 2.1e-12 75.9 95 49.5
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 3.6e-12 75.1 80 51.2
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 4.7e-12 74.7 82 50.0
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 8.0e-12 73.9 106 48.1
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 1.8e-11 72.8 103 48.5
THA.LOC104800510 Tarenaya hassleriana HOM05D012461 ORTHO05D014325 2.3e-11 72.4 94 44.7
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 8.8e-11 70.5 100 43.0
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.2e-10 70.1 87 41.4
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 2.0e-10 69.3 90 47.8
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 5.7e-10 67.8 95 46.3
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 9.8e-10 67.0 88 42.0
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 2.2e-09 65.9 102 40.2
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 4.9e-09 64.7 73 45.2
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 6.3e-09 64.3 77 39.0
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 8.3e-09 63.9 98 44.9
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 1.8e-08 62.8 91 45.1
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 1.8e-08 62.8 93 39.8
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 1.8e-08 62.8 88 45.5
RcHm_v2.0_Chr3g0470211 Rosa chinensis HOM05D022265 ORTHO05D010490 3.1e-08 62.0 96 41.7
FAN05G4022 Fragaria x ananassa HOM05D022265 ORTHO05D010490 7.0e-08 60.8 91 44.0
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 1.2e-07 60.1 92 45.7
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 1.6e-07 59.7 93 44.1
Solyc11g071380.1 Solanum lycopersicum HOM05D008514 ORTHO05D010490 2.0e-07 59.3 87 41.4
Sopen11g029060 Solanum pennellii HOM05D008514 ORTHO05D010490 2.0e-07 59.3 87 41.4
PGSC0003DMG400046267 Solanum tuberosum HOM05D008514 ORTHO05D010490 2.7e-07 58.9 88 42.0
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 3.5e-07 58.5 111 37.8
Hma1.2p1_0101F.1_g049390 Hydrangea macrophylla HOM05D008514 ORTHO05D010490 3.5e-07 58.5 45 62.2
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 7.7e-07 57.4 94 39.4
Nitab4.5_0003419g0020 Nicotiana tabacum HOM05D008514 ORTHO05D010490 1.3e-06 56.6 77 40.3
MELO3C035640.2 Cucumis melo HOM05D029204 ORTHO05D010490 6.6e-06 54.3 78 44.9
Sc12g0004870 Simmondsia chinensis HOM05D008514 ORTHO05D387401 6.6e-06 54.3 78 39.7
CsaV3_1G015250 Cucumis sativus L. HOM05D029204 ORTHO05D010490 8.6e-06 53.9 60 53.3
Nitab4.5_0008285g0040 Nicotiana tabacum HOM05D008514 ORTHO05D010490 8.6e-06 53.9 29 69.0


User provided reference genes

Program Settings