Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.6e-122 442.6 202 100.0
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 3.7e-106 388.3 195 89.2
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.9e-102 375.9 199 85.4
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.7e-101 371.3 199 84.9
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 4.7e-101 371.3 199 84.9
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.3e-100 369.0 199 84.4
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 5.2e-100 367.9 216 77.3
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 5.2e-84 314.7 200 71.5
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.8e-82 308.9 200 67.5
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 3.7e-82 308.5 200 67.0
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.1e-81 305.4 201 67.2
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 9.1e-81 303.9 200 67.0
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 2.7e-80 302.4 200 65.0
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.5e-80 302.0 200 67.0
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 7.7e-80 300.8 198 66.7
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.7e-79 299.7 209 65.6
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.9e-79 298.9 200 66.5
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.1e-78 297.0 202 68.3
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 5.5e-78 294.7 201 68.2
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 9.5e-78 293.9 202 64.9
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 9.5e-78 293.9 202 64.9
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 9.5e-78 293.9 203 66.5
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.1e-77 292.7 200 64.0
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 8.0e-77 290.8 206 62.1
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.8e-76 289.7 200 64.5
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 3.0e-76 288.9 200 63.5
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 5.2e-76 288.1 207 60.9
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.2e-75 287.0 201 62.2
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 5.7e-75 284.6 200 62.5
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 7.5e-75 284.3 207 63.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.3e-74 283.5 200 62.5
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 6.3e-74 281.2 180 71.1
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.4e-73 280.0 200 63.0
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.8e-73 279.6 189 64.6
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 7.0e-73 277.7 205 63.4
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.6e-72 276.6 197 62.4
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.7e-72 275.8 205 63.4
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.7e-72 275.8 223 59.6
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 2.7e-72 275.8 190 63.7
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 4.5e-72 275.0 205 62.4
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 5.9e-72 274.6 200 62.5
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.0e-71 273.9 229 58.1
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.7e-71 273.1 218 60.1
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.7e-71 273.1 202 60.9
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 6.6e-71 271.2 178 67.4
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.6e-71 271.2 189 64.0
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 8.6e-71 270.8 175 67.4
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 8.6e-71 270.8 170 68.2
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 8.6e-71 270.8 204 62.3
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.1e-70 270.4 196 64.3
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 2.5e-70 269.2 193 62.7
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 4.3e-70 268.5 218 58.7
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 4.3e-70 268.5 171 68.4
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 4.3e-70 268.5 200 62.5
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 4.3e-70 268.5 200 61.5
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.6e-70 268.1 185 65.4
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 5.6e-70 268.1 201 63.7
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 7.3e-70 267.7 196 60.7
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 9.5e-70 267.3 188 61.2
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.2e-69 266.9 185 64.9
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 1.2e-69 266.9 193 61.7
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.1e-69 266.2 193 61.1
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 4.7e-69 265.0 206 61.7
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 8.0e-69 264.2 173 65.9
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 8.0e-69 264.2 192 63.5
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.0e-68 263.8 203 61.1
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.0e-68 263.8 197 62.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 5.2e-68 261.5 189 61.9
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 5.2e-68 261.5 219 57.1
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 5.2e-68 261.5 205 62.0
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 8.9e-68 260.8 201 63.2
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.2e-67 260.4 184 65.2
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 2.0e-67 259.6 202 62.4
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.0e-67 259.6 231 55.0
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 2.6e-67 259.2 226 58.0
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 4.4e-67 258.5 176 64.8
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 4.4e-67 258.5 205 59.5
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 5.8e-67 258.1 207 58.0
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 5.8e-67 258.1 202 61.9
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 5.8e-67 258.1 198 63.1
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.7e-66 256.5 205 61.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 6.4e-66 254.6 205 61.5
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.4e-65 253.4 200 57.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.4e-65 253.4 200 57.5
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.4e-65 253.4 177 62.7
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.4e-65 253.4 200 60.5
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.4e-65 253.4 222 58.6
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 2.4e-65 252.7 205 60.0
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 7.0e-65 251.1 200 60.0
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.6e-64 250.0 196 59.2
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.5e-64 248.8 204 59.8
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.5e-64 248.8 204 59.8
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 5.0e-63 245.0 154 70.1
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.9e-62 243.0 157 65.6
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 1.6e-61 240.0 202 58.9
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 5.2e-60 235.0 202 56.4
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 4.4e-59 231.9 157 64.3
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.2e-58 229.6 178 61.8
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 8.3e-58 227.6 145 69.0
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.4e-57 226.9 134 76.9
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.9e-57 226.5 134 76.9
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.9e-57 226.5 134 76.9
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 4.1e-57 225.3 211 54.5
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 5.4e-57 224.9 134 75.4
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.6e-56 223.4 206 56.8
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-54 217.2 206 55.8
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.5e-54 216.9 205 50.7
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.3e-54 215.7 110 80.0
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.3e-54 215.7 169 59.8
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.1e-53 213.0 195 51.3
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.1e-52 209.1 113 79.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 9.6e-46 187.6 138 58.7
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 2.9e-42 176.0 200 46.0
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.9e-33 146.7 84 67.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 3.0e-31 139.4 104 56.7
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.6e-29 133.7 90 61.1
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.8e-29 132.9 84 61.9
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 3.1e-28 129.4 101 53.5
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.2e-25 119.4 62 79.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.4e-12 77.4 130 40.0
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 3.9e-07 59.3 116 35.3


User provided reference genes

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