Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 4.8e-71 271.2 149 100.0
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.4e-54 215.7 156 82.1
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.3e-52 209.9 144 85.4
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.8e-49 197.6 153 77.8
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 9.8e-48 193.7 152 77.6
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 4.6e-45 184.9 143 78.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 4.6e-37 158.3 155 65.2
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.5e-35 153.3 140 66.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 3.6e-34 148.7 146 62.3
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.4e-33 146.0 136 61.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.0e-33 145.2 135 65.2
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 5.2e-33 144.8 129 63.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.2e-32 143.7 132 62.1
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.5e-32 143.3 132 64.4
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.4e-32 142.1 139 62.6
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 5.8e-32 141.4 118 65.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 7.6e-32 141.0 132 64.4
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 9.9e-32 140.6 152 59.2
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 9.9e-32 140.6 126 63.5
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 9.9e-32 140.6 109 68.8
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.3e-31 140.2 95 76.8
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.7e-31 139.8 121 63.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.9e-31 139.0 145 59.3
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 4.9e-31 138.3 106 68.9
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 4.9e-31 138.3 127 62.2
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 6.4e-31 137.9 142 59.2
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 6.4e-31 137.9 131 63.4
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 8.4e-31 137.5 115 67.0
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.1e-30 137.1 123 63.4
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-30 137.1 147 59.2
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.9e-30 136.3 106 67.0
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.9e-30 136.3 106 67.0
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.4e-30 136.0 118 66.9
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.2e-30 135.6 106 67.0
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 3.2e-30 135.6 117 65.8
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 5.4e-30 134.8 102 68.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 7.1e-30 134.4 104 67.3
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.1e-30 134.4 106 66.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 9.2e-30 134.0 143 56.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 9.2e-30 134.0 95 71.6
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.2e-29 133.7 117 67.5
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.2e-29 133.7 137 59.9
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.1e-29 132.9 101 67.3
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.7e-29 132.5 137 58.4
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 4.6e-29 131.7 150 57.3
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 6.0e-29 131.3 105 66.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 6.0e-29 131.3 133 59.4
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.0e-28 130.6 140 57.9
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.7e-28 129.8 142 54.9
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.0e-28 129.0 140 52.9
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 5.1e-28 128.3 119 58.8
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.1e-28 128.3 105 63.8
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 5.1e-28 128.3 106 65.1
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 5.1e-28 128.3 113 63.7
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 5.1e-28 128.3 134 61.2
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 6.6e-28 127.9 129 59.7
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.1e-27 127.1 139 60.4
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-27 126.7 105 62.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.9e-27 126.3 105 62.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.9e-27 126.3 140 56.4
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.9e-27 126.3 97 71.1
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 1.9e-27 126.3 123 61.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.5e-27 125.9 100 72.0
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 2.5e-27 125.9 128 57.8
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.3e-27 125.6 123 61.0
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 5.6e-27 124.8 141 53.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 7.3e-27 124.4 91 70.3
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 7.3e-27 124.4 129 58.1
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.2e-26 123.6 116 64.7
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.6e-26 123.2 136 54.4
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.6e-26 123.2 108 61.1
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.1e-26 122.9 138 53.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 2.8e-26 122.5 91 69.2
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 2.8e-26 122.5 119 59.7
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.6e-26 122.1 110 64.5
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 3.6e-26 122.1 89 75.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 6.2e-26 121.3 106 61.3
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.1e-25 120.6 102 66.7
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.8e-25 119.8 125 56.0
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.8e-25 119.8 140 52.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.4e-25 119.4 104 62.5
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.9e-25 117.9 130 56.2
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 6.9e-25 117.9 102 59.8
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 9.0e-25 117.5 102 60.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.5e-24 116.7 128 54.7
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.4e-24 115.2 131 53.4
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.3e-23 113.6 108 54.6
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.2e-23 112.8 84 66.7
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 8.4e-23 110.9 140 50.0
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.1e-22 110.5 101 60.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.4e-22 109.4 126 54.8
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.2e-21 107.1 129 51.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.2e-21 107.1 130 53.1
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.1e-21 106.3 78 73.1
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.7e-21 105.9 142 47.9
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.6e-21 105.1 89 66.3
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.0e-20 104.0 158 42.4
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 3.9e-20 102.1 94 60.6
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 3.9e-20 102.1 119 52.1
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.3e-19 99.0 113 58.4
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 4.0e-17 92.0 61 78.7
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 6.9e-17 91.3 98 49.0
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 1.2e-16 90.5 89 55.1
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.5e-16 90.1 94 50.0
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.6e-16 89.4 53 84.9
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 3.4e-16 89.0 90 48.9
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 5.8e-16 88.2 128 43.8
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 7.1e-14 81.3 80 56.2
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.6e-13 78.6 104 47.1
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 6.7e-12 74.7 94 41.5
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-11 71.6 134 35.8
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 5.3e-09 65.1 140 37.1


User provided reference genes

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