Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 4.9e-183 644.8 345 100.0
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.0e-164 583.9 345 88.1
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 4.3e-163 578.6 340 88.8
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 2.0e-160 569.7 284 93.7
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.4e-158 563.5 285 91.9
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 1.4e-158 563.5 285 91.9
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 3.9e-156 555.4 282 90.4
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 3.8e-151 538.9 285 88.8
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 8.4e-151 537.7 285 86.7
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 3.9e-148 528.9 285 85.6
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 8.7e-148 527.7 285 84.9
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 1.9e-147 526.6 285 85.6
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.3e-147 525.8 285 85.3
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 3.3e-147 525.8 285 86.0
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 4.1e-145 518.8 283 85.2
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 4.5e-144 515.4 285 83.9
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 1.0e-143 514.2 285 83.2
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.3e-143 513.8 285 85.3
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 2.2e-143 513.1 262 90.1
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 4.2e-142 508.8 262 89.7
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 1.2e-141 507.3 285 81.8
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.6e-141 506.9 285 83.9
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 6.1e-141 505.0 287 80.8
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 6.1e-141 505.0 298 79.5
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 7.9e-141 504.6 258 89.1
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 7.9e-141 504.6 261 89.3
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 1.4e-140 503.8 285 82.1
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 3.0e-140 502.7 278 82.4
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 3.9e-140 502.3 283 83.0
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 6.7e-140 501.5 285 81.1
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 6.7e-140 501.5 258 88.8
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 6.7e-140 501.5 282 82.6
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 8.8e-140 501.1 308 77.6
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 1.1e-139 500.7 277 83.4
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 2.5e-139 499.6 268 85.1
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 3.3e-139 499.2 261 88.5
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 4.3e-139 498.8 258 88.0
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 5.7e-139 498.4 285 80.7
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 5.7e-139 498.4 261 87.7
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 7.4e-139 498.0 261 88.1
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 7.4e-139 498.0 262 85.1
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 7.4e-139 498.0 285 80.0
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 7.4e-139 498.0 287 81.2
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 9.7e-139 497.7 285 81.4
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 1.3e-138 497.3 285 80.7
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.3e-138 497.3 285 82.5
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 2.8e-138 496.1 277 81.2
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 2.8e-138 496.1 291 79.7
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 3.7e-138 495.7 285 81.4
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 1.1e-137 494.2 285 79.3
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.8e-137 493.4 284 81.0
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 2.4e-137 493.0 283 79.5
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 3.1e-137 492.7 263 84.8
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 4.1e-137 492.3 285 81.1
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 5.3e-137 491.9 276 82.2
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 9.1e-137 491.1 262 84.4
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 2.0e-136 490.0 306 77.8
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 3.4e-136 489.2 276 81.5
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 4.5e-136 488.8 268 82.1
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 5.9e-136 488.4 277 81.9
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.3e-135 487.3 260 82.7
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 2.2e-135 486.5 293 79.2
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 2.2e-135 486.5 261 84.7
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 2.2e-135 486.5 270 82.2
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 2.9e-135 486.1 268 83.2
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 5.0e-135 485.3 280 78.2
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 8.5e-135 484.6 270 81.9
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.1e-134 484.2 277 81.6
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.9e-134 483.4 269 83.6
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 1.9e-134 483.4 257 83.3
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 3.2e-134 482.6 261 85.8
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 3.2e-134 482.6 259 84.9
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 2.1e-133 479.9 280 78.9
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 4.7e-133 478.8 286 78.3
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 1.0e-132 477.6 286 78.3
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 2.3e-132 476.5 286 78.0
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 2.3e-132 476.5 261 84.7
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 2.3e-132 476.5 263 84.0
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 3.0e-132 476.1 285 77.9
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 1.5e-131 473.8 288 77.8
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 7.4e-131 471.5 287 75.6
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 9.7e-131 471.1 287 77.0
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 1.3e-130 470.7 287 76.0
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 3.7e-130 469.2 259 81.9
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 1.1e-129 467.6 240 89.6
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 2.4e-129 466.5 264 81.1
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 1.5e-128 463.8 281 77.2
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 5.9e-128 461.8 265 80.8
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 1.3e-127 460.7 269 81.0
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 1.7e-127 460.3 293 74.7
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 1.7e-127 460.3 262 81.3
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 2.2e-127 459.9 263 81.0
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 6.5e-127 458.4 291 75.3
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.4e-126 457.2 283 74.9
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 1.4e-126 457.2 253 83.4
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 7.2e-126 454.9 281 74.7
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.2e-125 454.1 291 74.2
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.6e-125 452.6 297 70.7
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 1.8e-124 450.3 345 65.2
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 3.0e-124 449.5 254 78.0
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 3.0e-124 449.5 287 75.3
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 3.9e-124 449.1 271 77.5
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 1.3e-122 444.1 302 71.2
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 4.8e-122 442.2 240 84.2
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 4.1e-121 439.1 301 70.8
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 9.1e-121 438.0 285 73.3
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 5.5e-118 428.7 236 84.3
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 1.4e-116 424.1 261 75.5
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 4.0e-116 422.5 277 72.2
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 6.7e-116 421.8 279 72.0
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 1.2e-115 421.0 251 79.3
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 5.7e-115 418.7 339 61.7
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 2.5e-110 403.3 291 66.0
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 4.0e-108 396.0 260 73.8
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 1.1e-105 387.9 204 84.3
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 4.0e-100 369.4 212 77.8
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 5.7e-99 365.5 183 91.3
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.5e-94 350.9 288 59.4
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 3.3e-94 349.7 298 58.4
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 2.1e-93 347.1 295 55.3
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.7e-90 337.4 195 81.0
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 8.3e-90 335.1 278 60.4
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 9.2e-89 331.6 174 89.1
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 2.5e-86 323.6 173 86.7
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 2.5e-86 323.6 173 86.7
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 4.3e-86 322.8 198 78.3
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 2.8e-85 320.1 267 58.8
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.0e-84 316.2 204 77.0
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.5e-83 314.3 245 62.4
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.7e-82 310.8 194 77.3
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 1.7e-82 310.8 173 82.7
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 8.9e-76 288.5 269 55.4
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 1.7e-74 284.3 269 56.1
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 2.4e-73 280.4 203 69.0
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 1.7e-66 257.7 252 52.4
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 2.2e-66 257.3 287 48.1
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 8.4e-66 255.4 231 55.4
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 9.2e-65 251.9 250 50.4
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.2e-59 235.0 191 60.2
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.5e-59 234.6 204 61.3
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.7e-58 231.1 152 75.0
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.7e-56 223.8 139 76.3
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 6.0e-56 222.6 135 77.8
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 5.1e-55 219.5 230 52.6
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 2.5e-54 217.2 179 57.0
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 3.1e-52 210.3 230 48.3
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 1.6e-45 188.0 239 44.4
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 3.1e-44 183.7 202 48.5
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 1.0e-39 168.7 128 62.5
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 1.3e-39 168.3 124 62.1
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 8.2e-37 159.1 92 76.1
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 9.7e-30 135.6 81 71.6
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 3.8e-18 97.1 54 79.6
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 2.5e-17 94.4 49 81.6
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 2.5e-17 94.4 49 81.6
Cfa024013 Carpinus fangiana HOM05D040201 ORTHO05D034153 3.0e-07 60.8 141 29.8
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 5.2e-07 60.1 165 27.3


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