Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G224100 Theobroma cacao HOM05D013305 ORTHO05D011178 3.1e-44 181.4 92 100.0
COL.COLO4_09901 Corchorus olitorius HOM05D013305 ORTHO05D011178 1.2e-24 116.3 88 69.3
Gohir.D08G087400 Gossypium hirsutum HOM05D013305 ORTHO05D011178 4.2e-17 91.3 92 59.8
Gorai.004G092000 Gossypium raimondii HOM05D013305 ORTHO05D011178 4.2e-17 91.3 92 59.8
Gohir.A08G077600 Gossypium hirsutum HOM05D013305 ORTHO05D011178 1.6e-16 89.4 92 58.7
Haze_23060 Corylus avellana HOM05D013305 ORTHO05D011178 1.7e-13 79.3 92 53.3
Haze_23051 Corylus avellana HOM05D013305 ORTHO05D011178 4.9e-13 77.8 92 53.3
Haze_23056 Corylus avellana HOM05D013305 ORTHO05D011178 4.9e-13 77.8 92 53.3
Prupe.6G018100 Prunus persica HOM05D000843 ORTHO05D011178 1.7e-10 69.3 92 50.0
Manes.06G168700 Manihot esculenta HOM05D013305 ORTHO05D011178 8.6e-10 67.0 80 50.0
Potri.001G016100 Populus trichocarpa HOM05D067985 ORTHO05D011178 1.6e-08 62.8 78 46.2
Nn2g15573 Nelumbo nucifera HOM05D024378 ORTHO05D011178 2.8e-08 62.0 79 43.0
RcHm_v2.0_Chr5g0078161 Rosa chinensis HOM05D000843 ORTHO05D011178 2.8e-08 62.0 82 48.8
Atru.chr3.2516 Acer truncatum HOM05D013305 ORTHO05D011178 3.0e-07 58.5 88 44.3
CiPaw.13G165100 Carya illinoinensis HOM05D013305 ORTHO05D011178 5.2e-07 57.8 93 44.1
Sabra01G0011300 Salix brachista HOM05D067985 ORTHO05D011178 5.2e-07 57.8 77 41.6
Manes.14G014000 Manihot esculenta HOM05D013305 ORTHO05D011178 6.8e-07 57.4 80 47.5
THA.LOC104811127 Tarenaya hassleriana HOM05D010885 ORTHO05D012982 1.2e-06 56.6 81 40.7
Glyma.12G054900 Glycine max HOM05D019238 ORTHO05D011178 9.8e-06 53.5 80 42.5


User provided reference genes

Program Settings