Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 8.5e-185 650.2 329 100.0
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 8.0e-159 563.9 329 86.0
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.0e-158 563.5 330 85.2
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 8.8e-158 560.5 330 84.8
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 3.1e-155 552.0 321 87.9
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 3.1e-155 552.0 341 82.1
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 4.1e-139 498.4 327 74.6
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 2.6e-133 479.2 318 74.2
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 2.7e-130 469.2 326 73.0
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 3.9e-129 465.3 328 74.4
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 2.3e-126 456.1 323 70.9
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.1e-126 455.7 329 70.2
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 4.4e-125 451.8 323 71.8
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.7e-124 449.9 329 71.4
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.4e-123 446.8 317 69.7
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.4e-123 446.0 318 70.1
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 4.1e-123 445.3 326 68.7
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 5.4e-123 444.9 319 68.3
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 7.1e-123 444.5 326 68.7
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.2e-122 443.7 329 69.0
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 1.2e-122 443.7 326 67.5
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 4.6e-122 441.8 326 68.1
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 1.7e-121 439.9 329 65.7
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 2.3e-121 439.5 320 68.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 3.0e-121 439.1 301 74.4
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 6.6e-121 438.0 316 70.6
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 1.1e-120 437.2 324 67.0
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.5e-120 436.0 321 66.0
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 4.3e-120 435.3 321 66.7
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.3e-120 435.3 323 67.2
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.2e-119 433.7 321 66.4
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.2e-119 433.7 326 67.2
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 1.2e-119 433.7 326 67.2
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 2.8e-119 432.6 325 66.5
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 2.8e-119 432.6 312 67.3
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 8.9e-118 427.6 327 69.1
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.4e-117 425.2 328 65.2
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.4e-115 420.2 325 66.5
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 5.4e-115 418.3 322 65.5
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 5.4e-115 418.3 341 63.6
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 7.1e-115 417.9 327 65.1
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.2e-114 417.2 319 66.8
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.2e-114 417.2 316 65.2
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 2.1e-114 416.4 320 63.8
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.3e-113 413.7 316 65.2
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 1.3e-113 413.7 372 59.4
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 3.0e-113 412.5 317 65.3
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 3.0e-113 412.5 316 64.9
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 8.7e-113 411.0 316 65.5
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 8.7e-113 411.0 327 62.1
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 2.5e-112 409.5 316 65.5
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 3.3e-112 409.1 316 63.9
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 5.6e-112 408.3 329 63.2
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 5.6e-112 408.3 317 65.3
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 7.3e-112 407.9 316 64.6
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 2.8e-111 406.0 317 64.4
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 2.8e-111 406.0 313 63.3
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 3.6e-111 405.6 326 63.2
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.6e-111 405.6 325 64.6
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 1.4e-110 403.7 328 62.8
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.8e-110 403.3 329 62.0
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 3.1e-110 402.5 316 63.6
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 3.1e-110 402.5 318 65.1
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 4.0e-110 402.1 317 63.4
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 5.2e-110 401.7 330 61.8
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.9e-110 401.4 289 69.2
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 9.0e-110 401.0 321 62.9
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 2.6e-109 399.4 330 59.7
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 5.8e-109 398.3 329 63.5
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 9.9e-109 397.5 349 60.2
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 1.1e-107 394.0 322 61.8
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 7.1e-107 391.3 317 62.5
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 1.6e-106 390.2 316 62.3
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 2.1e-106 389.8 317 61.5
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 3.5e-106 389.0 317 62.1
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 4.6e-106 388.7 316 60.8
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.6e-106 388.7 291 68.4
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 9.6e-104 380.9 316 59.5
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 1.3e-103 380.6 327 61.5
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 1.6e-103 380.2 319 61.4
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.4e-102 377.1 325 61.2
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.8e-102 376.7 313 62.9
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.7e-100 370.2 315 61.9
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.4e-99 367.1 316 59.5
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.4e-99 367.1 316 59.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 5.4e-99 365.2 311 60.1
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 5.4e-99 365.2 311 60.1
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 5.4e-99 365.2 232 75.0
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 7.1e-99 364.8 322 59.0
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 1.2e-98 364.0 324 59.0
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 6.0e-98 361.7 371 53.9
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 2.3e-97 359.8 317 60.3
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 5.1e-97 358.6 295 63.7
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 6.7e-97 358.2 268 65.7
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 5.6e-96 355.1 327 58.4
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 5.6e-96 355.1 321 58.9
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.6e-95 353.6 322 58.1
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.9e-92 342.8 319 56.7
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 3.8e-92 342.4 325 56.3
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 3.2e-91 339.3 326 57.1
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 2.1e-90 336.7 319 57.1
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 4.6e-90 335.5 333 54.4
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 1.3e-89 334.0 319 56.7
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 2.3e-89 333.2 322 55.6
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 3.0e-89 332.8 322 55.6
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.9e-88 330.1 318 55.7
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 4.3e-88 328.9 327 53.2
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 3.7e-87 325.9 315 56.8
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 3.7e-87 325.9 310 57.1
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.8e-86 323.6 319 55.2
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 5.3e-86 322.0 332 52.7
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 2.0e-85 320.1 320 55.3
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 8.4e-84 314.7 328 51.5
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 2.5e-83 313.2 326 51.8
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 5.5e-83 312.0 319 53.0
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 9.3e-83 311.2 322 52.5
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.6e-82 310.5 332 53.3
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 3.5e-82 309.3 315 54.0
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.6e-79 300.4 319 52.0
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 6.3e-79 298.5 320 52.8
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.1e-78 297.7 317 50.2
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 4.2e-75 285.8 484 39.5
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 3.6e-74 282.7 319 50.5
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 6.7e-73 278.5 193 69.4
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 4.3e-72 275.8 223 67.3
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 4.3e-72 275.8 279 53.8
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-70 270.8 330 47.9
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 2.1e-66 256.9 321 46.7
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 3.9e-65 252.7 297 50.2
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 8.2e-63 245.0 205 59.5
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 4.7e-58 229.2 215 56.3
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 6.7e-57 225.3 313 41.5
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.1e-56 224.6 318 38.7
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 6.5e-52 208.8 192 54.7
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.6e-50 204.1 313 38.7
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 5.2e-49 199.1 138 66.7
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 8.8e-49 198.4 263 49.0
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 5.9e-45 185.7 314 35.7
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.0e-41 173.3 320 37.2
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.7e-39 167.5 115 73.9
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.7e-36 157.5 226 42.5
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 6.1e-34 149.1 115 63.5
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.6e-28 129.0 79 77.2
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 2.5e-27 127.1 161 44.7
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.6e-26 124.4 171 46.2
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 5.2e-25 119.4 116 62.9
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 6.6e-20 102.4 116 50.9
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 8.6e-20 102.1 118 53.4
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 7.3e-19 99.0 185 34.6
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.8e-18 97.1 236 33.1
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 1.1e-17 95.1 113 54.0
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.4e-17 94.7 110 50.9
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 4.4e-16 89.7 220 30.9
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 2.3e-09 67.4 52 53.8
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.3e-09 67.4 223 29.1
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.2e-08 65.1 171 31.0
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 1.5e-08 64.7 305 23.9
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 7.5e-08 62.4 48 54.2


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