Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 4.8e-109 397.9 207 100.0
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 5.7e-78 294.7 200 76.0
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.9e-71 271.9 201 73.6
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.8e-69 265.8 201 71.6
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 5.3e-68 261.5 201 71.6
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 9.1e-68 260.8 169 79.9
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.7e-64 249.2 202 60.4
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.3e-61 240.4 202 59.4
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 7.0e-60 234.6 200 60.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 7.0e-60 234.6 198 61.1
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.7e-59 232.6 200 59.5
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.3e-58 230.3 200 60.5
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.7e-58 229.9 196 59.7
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.5e-57 226.9 190 63.2
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 2.5e-57 226.1 200 57.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 9.8e-54 214.2 199 55.3
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.8e-53 212.6 200 56.0
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 4.8e-53 211.8 195 57.9
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.4e-52 210.3 199 54.3
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 3.1e-52 209.1 200 53.0
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 3.1e-52 209.1 199 58.3
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 1.6e-51 206.8 162 64.2
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 1.6e-51 206.8 199 54.3
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.7e-51 206.1 198 53.5
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 3.5e-51 205.7 201 53.2
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 5.9e-51 204.9 196 57.1
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.0e-50 204.1 193 55.4
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.3e-50 203.8 199 54.8
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.3e-50 203.8 200 52.0
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 2.3e-50 203.0 199 54.8
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.9e-50 202.6 195 55.4
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 2.9e-50 202.6 198 55.6
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 8.6e-50 201.1 199 49.7
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.1e-49 200.7 198 55.1
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 4.2e-49 198.7 201 53.2
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 1.6e-48 196.8 196 54.1
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 2.1e-48 196.4 203 52.2
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 2.8e-48 196.1 204 51.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.8e-48 196.1 192 53.6
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 8.0e-48 194.5 201 51.2
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.8e-47 193.4 171 53.8
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.8e-47 193.4 158 63.3
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 2.3e-47 193.0 173 54.3
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 2.3e-47 193.0 173 54.3
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.3e-47 193.0 192 51.0
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 5.2e-47 191.8 203 50.2
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 5.2e-47 191.8 184 53.3
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.0e-46 189.9 196 51.5
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 3.4e-46 189.1 201 50.7
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.8e-45 186.0 198 49.5
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 8.3e-45 184.5 196 53.1
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 1.8e-44 183.3 199 49.2
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.1e-44 182.2 198 52.0
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.4e-44 181.8 189 54.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 7.0e-44 181.4 202 47.0
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 9.2e-44 181.0 198 53.0
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 5.0e-42 175.3 168 50.0
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 1.1e-41 174.1 162 58.6
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 2.5e-41 172.9 199 48.7
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 4.3e-41 172.2 138 62.3
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 4.3e-41 172.2 198 49.0
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.2e-40 170.6 208 46.6
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 4.7e-40 168.7 175 51.4
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.0e-39 167.5 198 50.0
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.0e-38 163.3 200 48.0
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.4e-38 162.2 140 60.0
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 7.5e-38 161.4 134 57.5
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 7.5e-38 161.4 144 57.6
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.4e-36 157.1 144 54.9
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 6.0e-35 151.8 141 56.0
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.1e-33 147.5 200 43.0
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.5e-33 146.4 117 60.7
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.5e-33 146.4 205 42.9
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 1.1e-31 141.0 192 41.1
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 2.3e-31 139.8 198 41.9
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 2.3e-31 139.8 178 47.2
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 4.0e-31 139.0 148 47.3
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 4.0e-31 139.0 206 38.8
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 4.0e-31 139.0 193 43.0
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 5.2e-31 138.7 194 42.8
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 8.9e-31 137.9 198 41.4
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.2e-30 137.5 197 41.6
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.2e-30 137.5 197 41.6
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 2.2e-29 133.3 201 38.8
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 8.3e-29 131.3 176 45.5
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.1e-28 131.0 207 37.2
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.4e-28 130.6 208 36.5
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 1.4e-28 130.6 199 39.2
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.4e-28 130.6 161 46.6
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 7.0e-28 128.3 146 50.7
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 2.1e-27 126.7 206 36.9
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 5.1e-26 122.1 181 40.9
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 1.5e-25 120.6 147 45.6
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 4.7e-24 115.5 195 37.4
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 2.1e-19 100.1 203 33.0
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.6e-18 94.7 78 59.0
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 8.6e-18 94.7 121 42.1
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 9.5e-17 91.3 146 33.6
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 4.7e-16 89.0 198 30.8
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 3.4e-14 82.8 120 44.2
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 3.5e-11 72.8 148 31.8
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 7.8e-11 71.6 141 33.3


User provided reference genes

Program Settings