Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 1.7e-87 326.2 200 100.0
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 4.5e-64 248.4 182 89.0
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 5.9e-64 248.1 186 88.7
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.3e-52 209.5 186 66.7
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 2.2e-50 203.0 184 71.7
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 1.2e-48 197.2 185 61.6
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 5.9e-48 194.9 183 77.6
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 7.7e-48 194.5 198 60.6
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 3.3e-46 189.1 176 77.8
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 5.2e-44 181.8 188 59.0
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.2e-44 181.8 188 59.0
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 2.0e-43 179.9 188 54.3
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 3.4e-43 179.1 187 67.9
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 6.3e-42 174.9 184 54.3
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.4e-41 173.7 184 54.3
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.6e-40 170.2 186 55.9
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-40 170.2 186 55.4
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 4.5e-40 168.7 193 54.9
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.9e-40 168.3 188 56.4
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.0e-39 167.5 177 53.1
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.3e-39 167.2 193 52.3
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.3e-39 167.2 186 55.4
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 2.3e-39 166.4 185 55.7
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 5.0e-39 165.2 186 54.8
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 1.2e-37 160.6 187 55.6
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 2.1e-37 159.8 182 57.1
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 3.6e-37 159.1 190 48.9
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.2e-35 154.1 192 54.7
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.3e-34 150.6 185 50.8
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.1e-33 147.5 194 47.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.1e-33 147.5 189 54.0
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 2.4e-33 146.4 187 48.1
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.2e-33 146.0 171 51.5
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 4.1e-33 145.6 169 52.1
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.6e-32 143.7 197 51.8
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 2.0e-32 143.3 190 47.4
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 2.7e-32 142.9 186 51.1
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.0e-31 141.0 186 46.2
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.3e-31 140.6 193 48.7
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 1.7e-31 140.2 192 50.5
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 2.3e-31 139.8 177 67.2
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 3.3e-30 136.0 193 47.2
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 7.3e-30 134.8 184 47.8
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 9.5e-30 134.4 188 50.0
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.8e-29 132.9 188 48.9
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 2.3e-28 129.8 182 44.5
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 2.3e-28 129.8 182 44.5
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 2.3e-28 129.8 183 48.6
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 2.3e-28 129.8 186 49.5
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 6.8e-28 128.3 191 44.5
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 1.2e-27 127.5 187 46.5
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.2e-27 127.5 182 45.6
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 2.0e-27 126.7 189 47.1
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 2.6e-27 126.3 130 50.0
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 4.4e-27 125.6 164 67.7
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 5.8e-27 125.2 84 77.4
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 7.5e-27 124.8 194 46.4
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.3e-26 124.0 186 48.9
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.3e-26 124.0 191 48.7
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 3.7e-26 122.5 195 50.8
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 4.9e-26 122.1 188 47.9
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 6.4e-26 121.7 122 56.6
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 1.9e-25 120.2 196 49.5
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 5.4e-25 118.6 123 57.7
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.2e-24 117.5 183 47.5
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 1.6e-24 117.1 189 46.6
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 4.6e-24 115.5 188 46.3
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 1.0e-23 114.4 193 42.5
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.7e-23 113.6 183 45.9
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 3.9e-23 112.5 90 72.2
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 5.0e-23 112.1 193 42.0
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 6.6e-23 111.7 150 46.7
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.9e-22 110.2 138 52.9
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 5.6e-22 108.6 189 51.9
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 9.5e-22 107.8 192 48.4
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 2.1e-21 106.7 183 41.0
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 1.4e-20 104.0 188 41.5
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 6.8e-20 101.7 185 44.3
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 6.8e-20 101.7 124 52.4
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 8.9e-20 101.3 188 42.6
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 4.4e-19 99.0 192 42.2
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 5.8e-19 98.6 186 39.2
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.3e-18 97.4 124 49.2
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 3.7e-18 95.9 185 39.5
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 6.4e-18 95.1 177 43.5
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 6.4e-18 95.1 191 40.3
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 1.1e-17 94.4 185 38.9
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 1.1e-17 94.4 185 39.5
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 3.2e-17 92.8 132 48.5
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 3.2e-17 92.8 187 36.9
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 4.1e-17 92.4 185 37.3
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 4.1e-17 92.4 161 47.8
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 7.1e-17 91.7 190 38.4
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 3.5e-16 89.4 188 38.8
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 4.6e-16 89.0 193 44.6
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 3.0e-15 86.3 124 46.8
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 3.0e-15 86.3 197 39.1
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 2.1e-13 80.1 191 34.6
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 2.8e-13 79.7 136 43.4
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 4.9e-10 68.9 133 39.1
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 1.4e-09 67.4 168 36.9
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 1.3e-07 60.8 131 48.9


User provided reference genes

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