Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G167900 Theobroma cacao HOM05D008750 ORTHO05D010839 2.9e-70 268.5 137 100.0
Duzib168G0353 Durio zibethinus HOM05D008750 ORTHO05D010839 2.1e-44 182.6 139 74.8
COL.COLO4_38413 Corchorus olitorius HOM05D008750 ORTHO05D010839 3.7e-33 145.2 145 62.1
COL.COLO4_38410 Corchorus olitorius HOM05D008750 ORTHO05D010839 6.1e-28 127.9 110 67.3
MELO3C004079.2 Cucumis melo HOM05D008750 ORTHO05D010839 9.4e-21 104.0 112 56.2
Manes.06G024500 Manihot esculenta HOM05D008750 ORTHO05D010839 4.7e-20 101.7 117 56.4
Manes.06G024650 Manihot esculenta HOM05D008750 ORTHO05D010839 6.1e-20 101.3 90 62.2
Rhsim01G0007300 Rhododendron simsii HOM05D008750 ORTHO05D010839 5.7e-18 94.7 94 53.2
CsaV3_2G008040 Cucumis sativus L. HOM05D008750 ORTHO05D010839 1.2e-15 87.0 79 59.5
Eucgr.C02392 Eucalyptus grandis HOM05D008750 ORTHO05D010839 7.7e-15 84.3 128 41.4
Dinv42750 Davidia involucrata HOM05D008750 ORTHO05D010839 2.9e-14 82.4 95 49.5
Dinv43352 Davidia involucrata HOM05D008750 ORTHO05D010839 2.9e-14 82.4 95 49.5
Rhsim03G0263300 Rhododendron simsii HOM05D008750 ORTHO05D010839 7.2e-13 77.8 119 44.5
COL.COLO4_38414 Corchorus olitorius HOM05D008750 ORTHO05D010839 9.4e-13 77.4 69 62.3
AUR62041658 Chenopodium quinoa HOM05D008750 ORTHO05D010839 2.1e-12 76.3 107 48.6
CSS0033938 Camellia sinensis var. sinensis HOM05D008750 ORTHO05D010839 6.1e-12 74.7 96 45.8
DCAR_017964 Daucus carota HOM05D008750 ORTHO05D010839 1.0e-11 73.9 116 46.6
Sed0019741 Sechium edule HOM05D008750 ORTHO05D010839 5.2e-11 71.6 110 42.7
AUR62016235 Chenopodium quinoa HOM05D008750 ORTHO05D010839 6.8e-11 71.2 113 43.4
HanXRQChr05g0137541 Helianthus annuus HOM05D008750 ORTHO05D010839 6.8e-11 71.2 100 48.0
Rhsim03G0263400 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.2e-10 70.5 82 48.8
Sed0004116 Sechium edule HOM05D008750 ORTHO05D010839 1.2e-10 70.5 110 43.6
EL10Ac3g05536 Beta vulgaris HOM05D008750 ORTHO05D010839 4.4e-10 68.6 104 44.2
DCAR_017963 Daucus carota HOM05D008750 ORTHO05D010839 4.4e-10 68.6 93 50.5
DCAR_017962 Daucus carota HOM05D008750 ORTHO05D010839 5.7e-10 68.2 105 46.7
ECA236G4119 Erigeron canadensis HOM05D008750 ORTHO05D010839 5.7e-10 68.2 109 45.9
Lj7C470T7 Lonicera japonica HOM05D008750 ORTHO05D010839 1.7e-09 66.6 76 52.6
DCAR_017961 Daucus carota HOM05D008750 ORTHO05D010839 2.8e-09 65.9 104 45.2
Lsat_1_v5_gn_8_66041 Lactuca sativa HOM05D008750 ORTHO05D010839 4.8e-09 65.1 101 44.6
Lsat_1_v5_gn_8_66061 Lactuca sativa HOM05D008750 ORTHO05D010839 4.8e-09 65.1 92 44.6
Lj7C470T6 Lonicera japonica HOM05D008750 ORTHO05D010839 6.3e-09 64.7 124 38.7
Lsat_1_v5_gn_8_65921 Lactuca sativa HOM05D008750 ORTHO05D010839 8.3e-09 64.3 95 43.2
Nn4g24057 Nelumbo nucifera HOM05D041019 ORTHO05D010839 1.4e-08 63.5 107 43.0
ECA236G4277 Erigeron canadensis HOM05D008750 ORTHO05D010839 4.1e-08 62.0 114 41.2
Lj1C678T11 Lonicera japonica HOM05D000487 ORTHO05D000405 5.4e-08 61.6 105 40.0
Lj2C67T7 Lonicera japonica HOM05D008750 ORTHO05D010839 9.1e-08 60.8 73 47.9
TAR622G0042 Trochodendron aralioides HOM05D041019 ORTHO05D010839 7.7e-07 57.8 111 40.5
DCAR_017960 Daucus carota HOM05D008750 ORTHO05D010839 5.0e-06 55.1 92 39.1


User provided reference genes

Program Settings