Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.5e-209 730.7 365 100.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.9e-185 652.5 391 84.4
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.0e-167 593.6 405 77.3
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.4e-166 588.2 392 77.0
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 9.8e-166 587.0 391 77.2
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.0e-159 567.0 393 75.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.3e-141 506.9 389 67.4
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.9e-140 503.1 373 67.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.4e-140 502.7 384 66.9
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 5.1e-138 495.0 372 68.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 5.1e-138 495.0 384 65.6
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.1e-137 493.8 383 66.6
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.1e-136 489.6 386 65.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 8.9e-135 484.2 391 64.5
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 6.4e-133 478.0 392 62.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.7e-130 469.9 387 63.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 3.0e-130 469.2 369 63.4
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.1e-130 468.4 382 62.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.5e-129 466.8 385 62.9
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.5e-129 466.1 380 64.5
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.5e-129 466.1 387 64.6
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 5.6e-129 464.9 387 64.1
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.3e-129 464.5 382 62.3
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 7.3e-129 464.5 382 62.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 7.3e-129 464.5 381 63.0
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 5.2e-127 458.4 372 64.0
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.2e-126 457.2 388 62.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.4e-126 455.7 385 62.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 4.4e-126 455.3 368 64.9
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.3e-125 453.8 369 64.8
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.9e-125 451.8 380 60.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 8.4e-125 451.1 384 60.7
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.1e-123 446.4 391 61.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.5e-123 445.7 360 63.9
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 7.8e-123 444.5 370 63.8
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 7.8e-123 444.5 387 60.5
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.7e-122 443.4 320 71.2
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.3e-122 443.0 390 61.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.5e-121 440.3 372 59.9
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.1e-120 436.4 354 62.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 4.8e-120 435.3 380 61.3
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.8e-120 435.3 368 62.5
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.1e-119 432.6 385 59.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.3e-119 431.8 381 57.5
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 2.2e-117 426.4 387 58.4
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.7e-115 419.5 377 58.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 3.5e-115 419.1 379 58.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 6.0e-115 418.3 370 60.8
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 6.0e-115 418.3 357 61.6
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.3e-114 416.4 387 59.7
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 3.3e-113 412.5 387 55.3
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.1e-112 409.8 374 58.0
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.8e-112 408.7 372 60.5
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 6.2e-112 408.3 382 55.0
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 6.2e-112 408.3 374 57.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.3e-111 405.2 445 51.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.2e-110 404.1 374 57.2
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.0e-110 403.3 374 56.7
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 7.6e-110 401.4 375 57.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.3e-109 400.6 363 59.2
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 6.4e-109 398.3 355 57.7
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 3.2e-108 396.0 366 56.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 4.2e-108 395.6 296 67.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.7e-107 392.9 357 58.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 6.0e-107 391.7 370 58.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.3e-106 390.6 359 58.8
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.1e-106 388.7 372 55.4
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.5e-105 386.3 366 57.4
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 4.3e-105 385.6 386 54.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 7.4e-105 384.8 387 53.2
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.3e-104 384.0 373 55.0
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.1e-104 383.3 370 55.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.1e-103 380.9 367 55.6
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.4e-103 380.6 370 55.7
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 9.0e-103 377.9 367 54.8
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 9.0e-103 377.9 377 53.8
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 9.0e-103 377.9 379 54.4
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 9.0e-103 377.9 371 55.5
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 3.4e-102 375.9 369 54.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 7.6e-102 374.8 351 56.4
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.0e-101 374.4 369 53.7
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 2.2e-101 373.2 293 62.5
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.9e-101 372.9 351 56.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.9e-101 372.9 351 56.1
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.8e-101 372.5 355 54.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 6.5e-101 371.7 355 54.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 4.2e-100 369.0 335 57.0
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.3e-98 364.0 344 57.8
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.8e-98 363.6 239 74.1
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.3e-98 363.2 248 74.2
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 3.3e-97 359.4 233 74.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 7.4e-97 358.2 281 64.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 6.5e-93 345.1 236 73.7
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 6.7e-90 335.1 287 59.2
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.9e-87 325.1 274 60.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.4e-86 322.8 283 60.4
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.3e-85 320.9 403 47.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 7.9e-83 311.6 223 71.3
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 3.9e-82 309.3 308 54.9
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 2.8e-80 303.1 335 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.8e-79 300.4 332 50.9
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 3.1e-79 299.7 366 46.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.4e-78 296.2 160 85.0
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.0e-70 270.4 147 83.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.6e-70 270.0 304 48.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.6e-65 253.4 297 48.8
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.5e-57 227.6 194 64.9
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.1e-52 211.5 329 41.0
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.7e-51 206.8 171 58.5
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 5.2e-42 176.0 205 47.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.9e-40 170.2 157 57.3
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 3.7e-40 169.9 118 71.2
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 1.8e-39 167.5 242 40.1
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.5e-36 157.9 194 46.9
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.5e-28 131.3 204 35.8
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-25 121.3 71 80.3
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 8.6e-13 79.0 55 67.3


User provided reference genes

Program Settings