Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 9.9e-80 300.1 151 100.0
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.0e-52 210.3 151 75.5
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.3e-52 209.9 151 75.5
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.9e-52 208.4 151 74.8
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.4e-49 199.9 153 74.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.2e-40 170.2 146 65.1
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 4.5e-40 168.3 124 70.2
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.8e-39 165.2 142 64.1
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 6.5e-39 164.5 142 65.5
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 4.2e-38 161.8 140 62.9
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 9.3e-38 160.6 118 71.2
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.2e-37 160.2 96 85.4
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.6e-37 159.8 118 70.3
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.6e-37 158.7 150 60.0
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.0e-36 157.1 135 65.2
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 3.0e-36 155.6 116 71.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 5.1e-36 154.8 137 62.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 6.7e-36 154.5 142 61.3
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.9e-35 152.9 124 63.7
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 2.5e-35 152.5 140 59.3
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 5.7e-35 151.4 135 65.2
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 9.7e-35 150.6 137 61.3
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 9.7e-35 150.6 121 66.1
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 9.7e-35 150.6 101 76.2
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.3e-34 150.2 150 59.3
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.8e-34 149.1 117 68.4
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 4.8e-34 148.3 145 56.6
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 4.8e-34 148.3 100 75.0
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 6.3e-34 147.9 151 58.9
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.8e-33 146.4 150 56.7
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.4e-33 146.0 115 66.1
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 3.1e-33 145.6 140 60.0
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 5.3e-33 144.8 143 59.4
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 6.9e-33 144.4 124 63.7
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 9.1e-33 144.1 150 56.0
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 2.6e-32 142.5 146 58.9
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.6e-32 142.5 138 59.4
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 3.4e-32 142.1 130 60.0
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 4.5e-32 141.7 150 58.0
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 4.5e-32 141.7 144 58.3
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 7.7e-32 141.0 152 58.6
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.0e-31 140.6 151 54.3
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.3e-31 140.2 128 60.9
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.3e-31 140.2 138 59.4
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 3.8e-31 138.7 115 67.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 5.0e-31 138.3 140 53.6
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 8.5e-31 137.5 121 58.7
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.9e-30 136.3 148 56.8
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.9e-30 136.3 143 55.9
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.9e-30 136.3 151 54.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.9e-30 136.3 143 55.2
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 2.5e-30 136.0 108 65.7
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.5e-30 136.0 137 59.1
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 3.2e-30 135.6 114 64.0
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 3.2e-30 135.6 140 52.1
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 4.2e-30 135.2 140 52.1
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.2e-29 133.7 102 68.6
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 1.6e-29 133.3 155 54.8
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.1e-29 132.9 137 56.2
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 3.6e-29 132.1 149 54.4
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 3.6e-29 132.1 153 53.6
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 3.6e-29 132.1 111 64.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 3.6e-29 132.1 159 53.5
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.6e-29 131.7 153 52.9
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 4.6e-29 131.7 153 52.9
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.0e-28 130.6 154 53.2
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.8e-28 129.8 111 64.0
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.3e-28 129.4 104 67.3
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 3.0e-28 129.0 122 59.8
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.0e-28 129.0 114 62.3
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 3.9e-28 128.6 101 67.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 3.9e-28 128.6 101 67.3
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 5.1e-28 128.3 103 64.1
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 5.1e-28 128.3 87 78.2
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 8.8e-28 127.5 156 52.6
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.1e-27 127.1 119 61.3
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 1.5e-27 126.7 101 66.3
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 2.6e-27 125.9 110 62.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 3.3e-27 125.6 101 66.3
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 5.7e-27 124.8 112 60.7
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 7.4e-27 124.4 102 64.7
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.7e-26 123.2 126 53.2
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.2e-26 122.9 133 56.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.8e-25 119.8 151 49.0
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 2.4e-25 119.4 143 51.7
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 3.1e-25 119.0 140 51.4
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 3.1e-25 119.0 145 51.0
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 5.3e-25 118.2 76 80.3
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 9.1e-25 117.5 115 54.8
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 7.7e-24 114.4 95 65.3
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 2.2e-23 112.8 91 65.9
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 3.8e-23 112.1 84 70.2
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.8e-23 112.1 74 77.0
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 8.5e-23 110.9 72 80.6
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 7.2e-22 107.8 70 77.1
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 7.2e-22 107.8 109 53.2
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.2e-22 107.8 102 59.8
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.6e-21 106.7 112 54.5
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 7.4e-19 97.8 136 47.8
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.3e-18 97.1 88 59.1
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 3.1e-17 92.4 75 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.0e-16 89.7 129 42.6
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 3.5e-16 89.0 84 54.8
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 5.9e-16 88.2 62 72.6
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 7.7e-16 87.8 73 56.2
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.0e-15 87.4 92 52.2
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 8.5e-15 84.3 57 73.7
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 4.4e-11 72.0 49 73.5
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 2.8e-10 69.3 98 44.9


User provided reference genes

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