Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G157300 Theobroma cacao HOM05D013024 ORTHO05D015548 2.9e-111 405.2 198 100.0
Thecc.09G156700 Theobroma cacao HOM05D013024 ORTHO05D015548 9.6e-91 337.0 194 84.5
Thecc.09G156200 Theobroma cacao HOM05D013024 ORTHO05D015548 1.6e-90 336.3 194 84.5
Cpa.g.sc199.5 Carica papaya HOM05D013024 ORTHO05D015548 1.4e-33 147.1 211 41.7
Manes.09G062812 Manihot esculenta HOM05D013024 ORTHO05D015548 1.0e-23 114.4 139 45.3
CANSAT11G2620 Cannabis sativa HOM05D013024 ORTHO05D015548 8.5e-23 111.3 209 38.3
CANSAT21G1445 Cannabis sativa HOM05D013024 ORTHO05D015548 8.8e-20 101.3 103 47.6
Thecc.09G157200 Theobroma cacao HOM05D013024 ORTHO05D015548 7.5e-19 98.2 173 38.7
Haze_14633 Corylus avellana HOM05D013024 ORTHO05D015548 9.8e-19 97.8 148 39.9
Nn8g39630 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.7e-16 89.7 205 32.2
Thecc.09G156600 Theobroma cacao HOM05D013024 ORTHO05D015548 4.5e-16 89.0 213 34.3
Nn8g39635 Nelumbo nucifera HOM05D002727 ORTHO05D002856 7.7e-16 88.2 205 32.2
Thecc.09G156100 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-15 87.0 213 34.3
Thecc.09G156800 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-15 87.0 213 34.3
Nn8g40139 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.9e-14 83.6 162 33.3
Nn2g12179 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.6e-13 80.5 161 34.8
Rhsim01G0019500 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.1e-13 80.1 207 30.9
Nn8g40141 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.7e-13 79.7 162 33.3
Nn8g40185 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.7e-13 79.0 162 33.3
Aqoxy4G00886 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.4e-12 77.4 198 30.8
Nn2g12178 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.4e-12 77.4 158 33.5
Actinidia02639 Actinidia chinensis HOM05D002727 ORTHO05D002856 4.0e-12 75.9 158 34.8
Nn2g12182 Nelumbo nucifera HOM05D002727 ORTHO05D002856 6.8e-12 75.1 106 38.7
Dinv43298 Davidia involucrata HOM05D002727 ORTHO05D002856 1.5e-11 73.9 207 30.4
Dinv42803 Davidia involucrata HOM05D002727 ORTHO05D002856 3.4e-11 72.8 160 32.5
Nn8g40140 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.4e-11 72.8 162 29.6
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.4e-11 72.4 150 33.3
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.4e-11 72.4 150 33.3
Prupe.1G100500 Prunus persica HOM05D002727 ORTHO05D002856 1.3e-10 70.9 205 30.2
MD03G1035100 Malus domestica HOM05D002727 ORTHO05D002856 2.8e-10 69.7 210 29.5
Dinv42800 Davidia involucrata HOM05D002727 ORTHO05D002856 3.7e-10 69.3 143 34.3
Dinv43301 Davidia involucrata HOM05D002727 ORTHO05D002856 3.7e-10 69.3 143 34.3
Rhsim01G0020200 Rhododendron simsii HOM05D002727 ORTHO05D002856 3.7e-10 69.3 207 30.4
Aqoxy3G02264 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.4e-09 67.4 182 33.5
GSVIVG01023712001 Vitis vinifera HOM05D002727 ORTHO05D002856 1.8e-09 67.0 162 31.5
MD15G1046300 Malus domestica HOM05D002727 ORTHO05D002856 3.1e-09 66.2 209 26.8
Rhsim01G0018300 Rhododendron simsii HOM05D002727 ORTHO05D002856 3.1e-09 66.2 207 28.5
QL02p098200 Quercus lobata HOM05D002727 ORTHO05D002856 4.1e-09 65.9 103 37.9
Rhsim01G0020900 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.6e-08 63.9 202 29.7
MD03G1107500 Malus domestica HOM05D002727 ORTHO05D002856 2.0e-08 63.5 108 37.0
Rhsim01G0018600 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.3e-07 60.1 142 31.7
Prupe.1G100600 Prunus persica HOM05D002727 ORTHO05D002856 1.9e-06 57.0 205 29.8
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 4.3e-06 55.8 172 24.4


User provided reference genes

Program Settings