Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G156700 Theobroma cacao HOM05D013024 ORTHO05D015548 2.2e-114 415.6 202 100.0
Thecc.09G156200 Theobroma cacao HOM05D013024 ORTHO05D015548 1.0e-111 406.8 202 98.0
Thecc.09G157300 Theobroma cacao HOM05D013024 ORTHO05D015548 3.7e-90 335.1 194 84.5
Cpa.g.sc199.5 Carica papaya HOM05D013024 ORTHO05D015548 2.2e-34 149.8 209 42.6
Manes.09G062812 Manihot esculenta HOM05D013024 ORTHO05D015548 2.7e-24 116.3 139 46.0
CANSAT11G2620 Cannabis sativa HOM05D013024 ORTHO05D015548 3.3e-22 109.4 228 34.6
Thecc.09G157200 Theobroma cacao HOM05D013024 ORTHO05D015548 4.0e-20 102.4 166 39.2
CANSAT21G1445 Cannabis sativa HOM05D013024 ORTHO05D015548 6.9e-20 101.7 110 45.5
Thecc.09G156600 Theobroma cacao HOM05D013024 ORTHO05D015548 2.9e-18 96.3 167 35.3
Haze_14633 Corylus avellana HOM05D013024 ORTHO05D015548 6.5e-18 95.1 148 39.9
Thecc.09G156100 Theobroma cacao HOM05D013024 ORTHO05D015548 3.2e-17 92.8 167 34.7
Thecc.09G156800 Theobroma cacao HOM05D013024 ORTHO05D015548 3.2e-17 92.8 167 34.7
Nn8g39630 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.0e-15 86.3 156 35.9
Nn8g39635 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.5e-14 84.0 156 35.9
Aqoxy4G00886 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.8e-13 79.0 158 32.9
Nn8g40139 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.8e-13 79.0 206 31.1
Nn8g40141 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.8e-13 79.0 158 33.5
Nn8g40185 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.1e-12 77.8 159 33.3
Nn2g12178 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.4e-12 76.6 157 34.4
Rhsim01G0019500 Rhododendron simsii HOM05D002727 ORTHO05D002856 3.1e-12 76.3 207 29.5
Actinidia02639 Actinidia chinensis HOM05D002727 ORTHO05D002856 6.9e-12 75.1 155 33.5
Nn2g12179 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.5e-11 73.9 197 28.9
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.2e-10 70.1 159 30.8
Nn2g12182 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.2e-10 70.1 103 38.8
Nn8g40140 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.8e-10 69.3 206 29.1
Aqoxy3G02264 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 6.5e-10 68.6 181 30.9
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 6.5e-10 68.6 157 30.6
Rhsim01G0020200 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.5e-09 66.6 168 29.2
Rhsim01G0020900 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.5e-09 66.6 164 29.3
MD03G1035100 Malus domestica HOM05D002727 ORTHO05D002856 3.2e-09 66.2 206 27.2
Dinv42803 Davidia involucrata HOM05D002727 ORTHO05D002856 9.3e-09 64.7 165 29.1
Dinv43298 Davidia involucrata HOM05D002727 ORTHO05D002856 9.3e-09 64.7 165 29.1
Dinv42800 Davidia involucrata HOM05D002727 ORTHO05D002856 2.1e-08 63.5 148 31.1
Dinv43301 Davidia involucrata HOM05D002727 ORTHO05D002856 2.1e-08 63.5 148 31.1
Prupe.1G100500 Prunus persica HOM05D002727 ORTHO05D002856 6.1e-08 62.0 200 27.5
QL02p098200 Quercus lobata HOM05D002727 ORTHO05D002856 1.8e-07 60.5 103 35.9
Rhsim01G0018300 Rhododendron simsii HOM05D002727 ORTHO05D002856 3.0e-07 59.7 156 28.2
GSVIVG01023712001 Vitis vinifera HOM05D002727 ORTHO05D002856 8.7e-07 58.2 210 25.7
MD03G1107500 Malus domestica HOM05D002727 ORTHO05D002856 2.5e-06 56.6 105 32.4
Rhsim01G0018600 Rhododendron simsii HOM05D002727 ORTHO05D002856 4.3e-06 55.8 135 29.6
MD15G1046300 Malus domestica HOM05D002727 ORTHO05D002856 5.7e-06 55.5 208 26.4


User provided reference genes

Program Settings