Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 2.1e-150 535.8 291 100.0
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.2e-115 419.5 290 75.5
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 8.2e-115 417.5 290 75.2
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 7.2e-103 377.9 288 75.3
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 5.0e-96 355.1 287 65.2
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 7.2e-95 351.3 295 64.1
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.3e-93 346.3 294 61.9
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 1.3e-91 340.5 284 63.0
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 6.3e-91 338.2 273 61.5
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 2.4e-90 336.3 292 60.3
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.1e-90 335.5 296 58.4
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 3.8e-88 328.9 294 60.2
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.1e-87 327.4 298 57.4
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.1e-87 327.4 293 59.0
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.9e-87 326.6 286 57.3
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.9e-87 326.6 286 57.3
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.2e-87 325.5 294 57.1
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 7.2e-87 324.7 298 56.7
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.6e-86 323.6 282 60.3
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.6e-86 323.6 280 58.9
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 2.7e-86 322.8 297 58.6
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 3.6e-86 322.4 284 61.3
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 6.1e-86 321.6 284 60.2
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 8.0e-86 321.2 287 60.6
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.8e-85 320.1 284 60.6
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 4.0e-85 318.9 367 48.5
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.7e-85 318.2 303 56.1
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.2e-84 317.4 292 62.0
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 4.4e-84 315.5 283 59.0
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.3e-83 313.9 280 59.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 2.2e-83 313.2 285 58.9
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 1.1e-82 310.8 280 59.3
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 3.1e-82 309.3 283 60.1
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.0e-81 306.6 280 57.9
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 4.5e-81 305.4 281 58.4
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.9e-80 302.8 278 57.2
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 3.8e-80 302.4 290 56.2
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.5e-79 300.4 327 51.1
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 4.2e-79 298.9 281 58.7
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 4.2e-79 298.9 281 56.2
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 5.5e-79 298.5 287 56.8
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 2.1e-78 296.6 298 54.7
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 3.4e-76 289.3 301 51.2
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 9.8e-76 287.7 310 50.0
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 3.7e-75 285.8 330 50.6
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 8.3e-75 284.6 277 56.7
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 8.3e-75 284.6 279 54.8
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 1.4e-74 283.9 287 50.2
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 1.2e-73 280.8 279 53.0
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 5.0e-72 275.4 328 48.8
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.1e-71 274.2 287 51.6
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 1.1e-71 274.2 277 50.2
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 1.1e-71 274.2 277 50.2
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.5e-71 273.9 295 53.6
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.5e-71 273.9 295 53.6
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.5e-71 273.9 296 52.4
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 3.3e-71 272.7 279 53.4
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 4.2e-71 272.3 286 50.0
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 4.2e-71 272.3 284 50.4
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 9.5e-71 271.2 295 50.5
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 4.7e-70 268.9 256 57.0
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 1.4e-69 267.3 307 50.5
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 5.7e-68 261.9 287 49.8
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 7.5e-68 261.5 278 54.3
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 9.8e-68 261.2 296 52.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-67 260.8 278 54.0
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.7e-67 260.4 283 51.6
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.8e-67 259.6 289 49.5
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 4.1e-66 255.8 250 54.0
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 8.6e-64 248.1 317 44.8
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 8.6e-64 248.1 313 45.0
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.5e-63 247.3 310 47.4
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 4.3e-63 245.7 331 44.1
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 5.6e-63 245.4 331 45.0
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 4.7e-62 242.3 295 47.8
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 6.1e-62 241.9 326 44.2
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 6.1e-62 241.9 279 49.5
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.4e-61 240.7 274 48.9
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.2e-60 237.7 311 47.6
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.3e-59 234.2 215 53.5
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.9e-58 230.3 302 46.0
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 5.4e-58 228.8 283 43.8
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 6.0e-57 225.3 233 53.2
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 3.9e-56 222.6 365 38.6
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 4.9e-51 205.7 231 48.5
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 1.9e-50 203.8 274 42.7
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 9.2e-50 201.4 277 43.3
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 3.0e-48 196.4 250 44.0
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 8.9e-45 184.9 236 46.6
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 5.8e-44 182.2 297 40.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 6.4e-43 178.7 283 39.9
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.8e-38 163.3 296 37.8
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.2e-36 157.9 162 52.5
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 2.6e-36 156.8 173 50.9
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 6.4e-35 152.1 284 36.3
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.2e-34 149.8 291 35.4
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 4.3e-31 139.4 126 58.7
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 5.3e-29 132.5 91 67.0
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.9e-27 126.7 95 60.0
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 8.4e-27 125.2 170 41.8
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 6.9e-21 105.5 79 60.8
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 4.9e-19 99.4 110 50.9
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 4.2e-18 96.3 139 43.2
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 2.3e-16 90.5 151 39.7
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 3.3e-15 86.7 64 59.4
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 7.4e-15 85.5 147 37.4
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 1.4e-13 81.3 286 26.9


User provided reference genes

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