Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.2e-112 409.8 199 100.0
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.0e-100 368.6 201 90.5
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.0e-97 358.2 202 88.1
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.4e-94 347.8 203 85.7
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.3e-92 343.2 201 83.6
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.5e-91 339.7 200 82.5
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.3e-90 336.7 205 82.0
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.6e-90 336.3 202 81.2
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 6.2e-90 334.3 201 82.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.1e-89 333.6 204 81.9
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 4.0e-89 331.6 202 82.7
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 6.9e-89 330.9 199 79.9
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-88 329.7 199 82.4
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 2.6e-88 328.9 205 80.0
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.4e-88 328.6 199 81.9
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 3.4e-88 328.6 205 81.0
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 7.6e-88 327.4 199 80.9
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 9.9e-88 327.0 199 81.9
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.3e-87 326.6 199 80.4
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.7e-87 326.2 195 80.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 8.4e-87 323.9 199 79.9
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.4e-86 322.4 199 80.9
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 3.2e-86 322.0 170 93.5
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 4.2e-86 321.6 182 84.1
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 5.5e-86 321.2 182 83.5
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 9.3e-86 320.5 195 80.0
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.6e-85 319.7 204 79.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 2.1e-85 319.3 214 77.1
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 3.5e-85 318.5 167 88.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 3.5e-85 318.5 196 79.6
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.5e-85 318.5 192 79.7
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.0e-85 317.8 198 78.8
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 6.0e-85 317.8 202 77.2
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 7.9e-85 317.4 166 88.6
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.3e-84 316.6 166 88.0
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.3e-84 316.6 192 80.2
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 5.1e-84 314.7 196 78.6
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 8.7e-84 313.9 208 76.0
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.1e-83 313.5 196 80.1
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.5e-83 313.2 199 77.4
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.1e-82 309.3 199 75.4
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 2.8e-82 308.9 203 75.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 6.2e-82 307.8 206 75.7
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 6.2e-82 307.8 199 74.4
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.1e-81 307.0 196 74.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.1e-81 307.0 167 84.4
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.4e-81 306.6 166 84.9
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 2.4e-81 305.8 177 80.8
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.4e-81 305.8 203 74.4
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 3.1e-81 305.4 199 74.4
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 5.3e-81 304.7 187 78.6
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.3e-81 304.7 211 72.0
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 6.9e-81 304.3 166 85.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 9.0e-81 303.9 230 70.4
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.2e-80 303.5 178 80.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 3.4e-80 302.0 166 84.3
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 4.5e-80 301.6 199 74.4
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 4.5e-80 301.6 166 83.7
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 7.6e-80 300.8 165 83.6
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.0e-79 300.4 177 85.9
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.3e-79 300.1 205 73.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.2e-79 299.3 205 73.2
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 3.8e-79 298.5 182 75.8
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.8e-79 298.5 200 73.5
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.9e-78 296.2 199 73.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.9e-78 296.2 199 74.4
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 2.5e-78 295.8 206 70.9
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 5.5e-78 294.7 202 72.8
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 7.1e-78 294.3 171 80.1
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 9.3e-78 293.9 203 72.9
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.2e-77 293.5 210 68.6
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.6e-77 293.1 169 81.7
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 4.6e-77 291.6 195 71.3
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.3e-76 289.3 153 86.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 5.7e-75 284.6 168 80.4
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.1e-74 282.7 165 80.0
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 2.6e-72 275.8 164 81.1
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.5e-72 275.0 177 76.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.5e-70 269.2 175 78.3
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.1e-69 266.2 166 75.3
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 7.9e-69 264.2 137 88.3
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.3e-68 262.7 141 85.1
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 5.1e-68 261.5 184 72.3
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 8.2e-66 254.2 180 70.0
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.1e-65 251.9 143 83.9
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 9.1e-65 250.8 163 71.2
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.2e-61 240.4 141 78.7
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 8.8e-60 234.2 163 66.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.7e-59 231.5 171 63.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.4e-57 226.9 161 70.2
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 3.1e-57 225.7 152 71.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 9.1e-57 224.2 111 93.7
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.0e-47 194.1 151 65.6
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.3e-47 193.7 160 57.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.8e-28 130.2 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.1e-17 94.4 165 38.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.3e-10 70.9 133 36.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.1e-09 67.8 37 78.4
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 6.6e-07 58.5 133 33.1
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 5.6e-06 55.5 178 22.5
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 9.5e-06 54.7 137 31.4


User provided reference genes

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