Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G144200 Theobroma cacao HOM05D000175 ORTHO05D010751 9.2e-91 339.0 163 100.0
COL.COLO4_24065 Corchorus olitorius HOM05D000175 ORTHO05D010751 2.3e-70 271.2 163 83.4
Gohir.D06G047801 Gossypium hirsutum HOM05D000175 ORTHO05D010751 1.3e-65 255.4 162 76.5
Gorai.010G053600 Gossypium raimondii HOM05D000175 ORTHO05D010751 1.7e-65 255.0 162 76.5
Gohir.A11G252600 Gossypium hirsutum HOM05D000175 ORTHO05D010751 3.9e-57 227.3 145 75.2
Haze_21622 Corylus avellana HOM05D000175 ORTHO05D010751 1.1e-51 209.1 163 62.0
Cfa013209 Carpinus fangiana HOM05D000175 ORTHO05D010751 3.2e-51 207.6 163 62.0
CiPaw.07G217800 Carya illinoinensis HOM05D000175 ORTHO05D010751 5.1e-49 200.3 158 62.0
Duzib150G0592 Durio zibethinus HOM05D000175 ORTHO05D010751 1.4e-46 192.2 108 84.3
QL12p031294 Quercus lobata HOM05D000175 ORTHO05D010751 1.4e-46 192.2 151 61.6
Manes.03G064701 Manihot esculenta HOM05D000175 ORTHO05D010751 6.7e-41 173.3 165 55.8
Hma1.2p1_0003F.1_g003660 Hydrangea macrophylla HOM05D000175 ORTHO05D010751 2.5e-40 171.4 131 61.8
Duzib187G1137 Durio zibethinus HOM05D000175 ORTHO05D010751 2.8e-39 167.9 155 58.1
TWI32G0171 Tripterygium wilfordii HOM05D000175 ORTHO05D010751 1.8e-38 165.2 145 57.2
Dinv29350 Davidia involucrata HOM05D000175 ORTHO05D010751 2.0e-37 161.8 134 57.5
Cc08_g08310 Coffea canephora HOM05D000175 ORTHO05D010751 2.9e-36 157.9 160 49.4
Cpa.g.sc91.9 Carica papaya HOM05D000175 ORTHO05D010751 7.9e-34 149.8 145 51.7
MD14G1075600 Malus domestica HOM05D000175 ORTHO05D010751 7.9e-34 149.8 156 53.2
Actinidia13289 Actinidia chinensis HOM05D000175 ORTHO05D010751 3.0e-33 147.9 110 63.6
TAR629G1788 Trochodendron aralioides HOM05D000175 ORTHO05D010751 8.7e-33 146.4 140 52.1
Prupe.1G189500 Prunus persica HOM05D000175 ORTHO05D010751 1.5e-32 145.6 161 48.4
ClCG08G012890 Citrullus lanatus HOM05D000175 ORTHO05D010751 3.3e-32 144.4 145 48.3
MBI17_g42672_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D010751 1.8e-30 138.7 157 50.3
THA.LOC104820394 Tarenaya hassleriana HOM05D000175 ORTHO05D010751 5.3e-30 137.1 138 51.4
TAR636G0303 Trochodendron aralioides HOM05D000175 ORTHO05D010751 9.0e-30 136.3 132 51.5
Migut.A00274 Erythranthe guttata HOM05D000175 ORTHO05D010751 5.8e-29 133.7 142 50.7
PGR102G0839 Punica granatum HOM05D000175 ORTHO05D010751 5.5e-27 127.1 153 46.4
MSTRG.11739 Avicennia marina HOM05D000175 ORTHO05D010751 4.6e-26 124.0 122 50.0
Eucgr.H04959 Eucalyptus grandis HOM05D000175 ORTHO05D010751 3.0e-25 121.3 141 48.9
Sc12g0005540 Simmondsia chinensis HOM05D000175 ORTHO05D010751 6.7e-25 120.2 139 45.3
CANSAT80G2846 Cannabis sativa HOM05D000175 ORTHO05D010751 8.7e-25 119.8 157 44.6
Gohir.A09G065401 Gossypium hirsutum HOM05D000175 ORTHO05D010751 1.1e-24 119.4 75 77.3
SHI18614 Sapria himalayana HOM05D000175 ORTHO05D010751 1.9e-24 118.6 153 45.1
CDE06G1344 Ceratophyllum demersum HOM05D000175 ORTHO05D010751 3.7e-23 114.4 126 50.0
SGA_v2.0_scaffold27G11490 Striga asiatica HOM05D000175 ORTHO05D010751 8.2e-23 113.2 101 52.5
Rhsim02G0187200 Rhododendron simsii HOM05D000175 ORTHO05D010751 3.4e-21 107.8 92 57.6
Aqoxy1G00639 Aquilegia oxysepala HOM05D000175 ORTHO05D010751 3.8e-20 104.4 161 38.5
SalBow4G3013 Salvia bowleyana HOM05D000175 ORTHO05D010751 1.0e-17 96.3 101 48.5
DCAR_022873 Daucus carota HOM05D000175 ORTHO05D010751 5.7e-16 90.5 132 34.1
Gohir.A13G164950 Gossypium hirsutum HOM05D000175 ORTHO05D010751 5.9e-13 80.5 57 73.7
Gohir.A06G047800 Gossypium hirsutum HOM05D000175 ORTHO05D010751 3.6e-10 71.2 38 86.8


User provided reference genes

Program Settings