Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G142100 Theobroma cacao HOM05D000047 ORTHO05D000589 3.8e-90 334.7 160 100.0
Thecc.03G050100 Theobroma cacao HOM05D000047 ORTHO05D000589 3.4e-78 295.0 149 94.0
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 2.6e-38 162.5 86 89.5
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 5.6e-33 144.8 155 53.5
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 1.6e-32 143.3 155 52.9
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 3.1e-31 139.0 156 51.9
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 7.1e-28 127.9 103 61.2
Duzib177G0032 Durio zibethinus HOM05D000047 ORTHO05D000589 2.7e-27 125.9 155 48.4
Thecc.K0006900 Theobroma cacao HOM05D002881 ORTHO05D000589 2.7e-27 125.9 131 50.4
Thecc.02G289400 Theobroma cacao HOM05D000414 ORTHO05D000276 9.0e-23 110.9 111 49.5
Duzib248G1335 Durio zibethinus HOM05D000047 ORTHO05D000589 3.8e-21 105.5 95 52.6
Duzib168G2089 Durio zibethinus HOM05D000047 ORTHO05D000589 4.2e-20 102.1 69 66.7
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 7.9e-19 97.8 96 50.0
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.5e-17 93.6 43 95.3
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.9e-17 93.2 175 36.6
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.1e-16 89.7 156 35.9
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.3e-15 85.1 71 52.1
Duzib268G0838 Durio zibethinus HOM05D000092 ORTHO05D000042 6.9e-15 84.7 129 38.0
Ca_06964_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000589 2.0e-14 83.2 173 34.1
Thecc.05G094500 Theobroma cacao HOM05D000047 ORTHO05D000589 2.0e-14 83.2 44 79.5
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 2.6e-14 82.8 66 56.1
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 5.8e-14 81.6 155 36.8
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 7.6e-14 81.3 99 47.5
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.7e-13 80.1 174 34.5
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 2.2e-13 79.7 68 51.5
COL.COLO4_37417 Corchorus olitorius HOM05D000047 ORTHO05D000589 6.5e-13 78.2 69 49.3
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 6.5e-13 78.2 160 35.0
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 1.1e-12 77.4 154 34.4
TPR.G14980 Trifolium pratense HOM05D000047 ORTHO05D000589 1.9e-12 76.6 69 56.5
TPR.G31129 Trifolium pratense HOM05D000047 ORTHO05D000589 2.5e-12 76.3 67 50.7
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.1e-12 74.7 186 33.9
VMungo1127G1198 Vigna mungo HOM05D000066 ORTHO05D000589 9.3e-12 74.3 77 48.1
Sopen11g018130 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-11 73.6 153 34.0
COL.COLO4_25238 Corchorus olitorius HOM05D000047 ORTHO05D000589 2.7e-11 72.8 146 33.6
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 2.7e-11 72.8 127 36.2
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-10 70.9 147 32.7
CAN.G2.63 Capsicum annuum HOM05D000101 ORTHO05D000589 1.3e-10 70.5 150 30.7
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 2.3e-10 69.7 142 33.8
Medtr5g464720 Medicago truncatula HOM05D036441 ORTHO05D036722 3.0e-10 69.3 64 48.4
Sopen07g009210 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-10 69.3 174 32.2
Sabra01G0123300 Salix brachista HOM05D000047 ORTHO05D000589 3.9e-10 68.9 63 46.0
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 3.9e-10 68.9 146 32.9
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 5.1e-10 68.6 96 38.5
Sopen11g014820 Solanum pennellii HOM05D000047 ORTHO05D000044 8.7e-10 67.8 174 31.6
Sopen03g011900 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-09 67.0 70 42.9
Sopen05g011640 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-09 67.0 174 31.0
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 1.5e-09 67.0 152 32.9
Sopen01g012890 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-09 66.2 157 31.2
Sopen11g020130 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-09 66.2 156 30.8
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 2.5e-09 66.2 152 31.6
Sopen05g022170 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-09 65.9 156 31.4
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.3e-09 65.5 151 33.8
Sopen12g025230 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-09 65.5 153 32.7
TWI15G0057 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-09 65.5 55 49.1
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 4.3e-09 65.5 64 42.2
TWI39G1040 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-09 65.5 55 49.1
TWI09G0076 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.7e-09 65.1 64 40.6
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.7e-09 65.1 59 44.1
Sopen01g016600 Solanum pennellii HOM05D000047 ORTHO05D000044 7.4e-09 64.7 97 36.1
Sopen03g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 7.4e-09 64.7 174 32.2
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-09 64.3 70 38.6
Sopen07g017990 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-09 64.3 153 30.7
Sopen04g013020 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-08 63.9 97 36.1
Sopen04g022170 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-08 63.9 156 30.1
Sopen08g009730 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-08 63.9 64 39.1
Ca_02596_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.6e-08 63.5 67 47.8
Lalb_Chr03g0038251 Lupinus albus HOM05D000047 ORTHO05D000589 1.6e-08 63.5 77 41.6
Sopen06g010450 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-08 63.5 174 29.3
Sopen11g019400 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-08 63.2 156 30.1
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.2e-08 63.2 104 31.7
TPR.G22702 Trifolium pratense HOM05D000047 ORTHO05D000589 2.8e-08 62.8 153 30.7
TWI73G1077 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.8e-08 62.8 90 33.3
TPR.G35324 Trifolium pratense HOM05D000047 ORTHO05D000589 3.7e-08 62.4 96 35.4
Sopen01g019870 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-08 62.0 174 33.3
Sopen04g020160 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-08 62.0 149 30.2
CAN.G500.3 Capsicum annuum HOM05D000047 ORTHO05D000589 6.3e-08 61.6 111 32.4
CAN.G1202.17 Capsicum annuum HOM05D000047 ORTHO05D000589 1.1e-07 60.8 145 31.7
Sopen11g013590 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-07 60.8 174 31.6
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 1.4e-07 60.5 111 29.7
CAN.G1473.18 Capsicum annuum HOM05D000047 ORTHO05D000589 1.4e-07 60.5 139 30.2
CAN.G82.19 Capsicum annuum HOM05D000047 ORTHO05D000589 1.4e-07 60.5 105 33.3
Sopen02g008900 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-07 60.5 174 30.5
Sopen12g016880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-07 60.1 70 35.7
Sopen01g020560 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-07 59.7 149 31.5
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.4e-07 59.7 113 33.6
Sopen05g014250 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-07 59.7 156 30.8
Sopen05g027510 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-07 59.7 97 33.0
Sopen08g018560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-07 59.7 85 37.6
CAN.G660.48 Capsicum annuum HOM05D000128 ORTHO05D000059 3.1e-07 59.3 142 28.2
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 3.1e-07 59.3 27 88.9
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 3.1e-07 59.3 27 88.9
Sopen10g014590 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-07 59.3 119 30.3
Sopen12g009400 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-07 59.3 147 31.3
Sopen01g014300 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-07 58.9 59 37.3
Sopen02g012440 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-07 58.9 156 30.1
Sopen03g011510 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-07 58.9 70 35.7
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-07 58.9 174 30.5
Sopen11g013100 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-07 58.9 156 31.4
COL.COLO4_22341 Corchorus olitorius HOM05D000047 ORTHO05D000589 5.3e-07 58.5 43 55.8
CAN.G1392.6 Capsicum annuum HOM05D001831 ORTHO05D000589 6.9e-07 58.2 72 36.1
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 6.9e-07 58.2 70 38.6
Sopen04g012220 Solanum pennellii HOM05D000047 ORTHO05D000589 6.9e-07 58.2 66 37.9
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-07 57.8 178 29.8
MBI04_g35126_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D003772 1.2e-06 57.4 36 58.3
Sopen06g012960 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 57.4 150 31.3
Sopen07g015300 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 57.4 52 42.3
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-06 57.4 178 29.2
Sopen10g007040 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 57.4 166 28.3
Sopen12g026490 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 57.4 178 29.2
CAN.G370.4 Capsicum annuum HOM05D000047 ORTHO05D000589 1.5e-06 57.0 89 32.6
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 1.5e-06 57.0 70 35.7
CAN.G525.69 Capsicum annuum HOM05D000047 ORTHO05D000589 2.0e-06 56.6 72 33.3
Sopen09g024900 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-06 56.6 148 27.7
CAN.G1949.1 Capsicum annuum HOM05D000047 ORTHO05D000589 2.6e-06 56.2 61 39.3
Sopen02g019110 Solanum pennellii HOM05D000047 ORTHO05D000589 2.6e-06 56.2 145 29.0
Sopen05g014640 Solanum pennellii HOM05D000047 ORTHO05D000589 2.6e-06 56.2 153 28.8
Sopen12g011360 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-06 56.2 145 29.0
MBI05_g41581_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 3.4e-06 55.8 79 34.2
MBI14_g06531_MAGBIO Magnolia biondii HOM05D012823 ORTHO05D004676 3.4e-06 55.8 89 33.7
Sopen07g013240 Solanum pennellii HOM05D000047 ORTHO05D000589 3.4e-06 55.8 177 29.9
Sopen00g014000 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-06 55.5 145 28.3
Sopen01g015230 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-06 55.5 102 33.3
Sopen02g008050 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-06 55.5 94 31.9
Sopen09g009160 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-06 55.5 145 28.3
Sopen10g015640 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-06 55.5 153 30.1
Sopen11g013060 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-06 55.5 156 30.1
CAN.G186.8 Capsicum annuum HOM05D000047 ORTHO05D000589 5.9e-06 55.1 85 34.1
Sopen00g007140 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-06 55.1 145 27.6
Sopen02g008640 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-06 55.1 175 28.0
Sopen03g020400 Solanum pennellii HOM05D000014 ORTHO05D000093 5.9e-06 55.1 97 30.9
Sopen05g021720 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-06 55.1 143 32.9
Sopen07g007700 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-06 55.1 145 27.6
Sopen07g008920 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-06 55.1 158 30.4
Sopen09g024650 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-06 55.1 178 29.2
Medtr7g046515 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 54.7 60 45.0
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-06 54.7 87 33.3
Sopen02g008670 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-06 54.7 151 29.8
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-06 54.7 170 28.2
Sopen11g015560 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-06 54.7 157 26.8
Sopen12g016380 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-06 54.7 173 30.1
CAN.G1539.1 Capsicum annuum HOM05D000047 ORTHO05D000589 1.0e-05 54.3 59 37.3
CAN.G1658.6 Capsicum annuum HOM05D000047 ORTHO05D000589 1.0e-05 54.3 64 35.9
Sopen03g009440 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-05 54.3 126 29.4
Sopen03g025010 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-05 54.3 156 25.6
Sopen06g005050 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-05 54.3 138 30.4
Sopen10g014420 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-05 54.3 151 29.8
Sopen12g020880 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-05 54.3 94 34.0


User provided reference genes

Program Settings