Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 0.0e+00 1080.9 539 100.0
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.8e-288 995.3 539 92.6
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.2e-264 914.1 539 87.0
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 1.9e-258 895.6 532 85.5
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 9.5e-234 813.5 536 80.2
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.1e-233 810.8 536 80.2
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.8e-232 807.4 536 79.5
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.6e-220 769.6 568 71.5
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 5.0e-219 764.6 545 74.7
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.1e-218 763.5 570 70.7
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.8e-217 758.8 551 73.9
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 7.5e-215 750.7 555 73.7
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 3.9e-211 738.4 550 72.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 4.0e-208 728.4 565 69.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.9e-205 719.5 542 71.4
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.6e-204 716.5 550 70.2
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.6e-201 706.4 553 68.9
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 9.0e-200 700.7 551 69.3
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 3.4e-199 698.7 579 66.5
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 4.9e-198 694.9 546 70.3
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.7e-196 689.1 549 69.6
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 6.0e-196 688.0 533 68.1
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 7.3e-194 681.0 538 69.0
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 2.0e-191 672.9 549 67.9
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.3e-190 670.2 515 70.9
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.2e-190 669.5 512 70.5
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 4.9e-190 668.3 569 64.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 7.9e-188 661.0 512 69.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.8e-187 659.8 549 66.3
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.1e-186 657.1 550 66.2
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.1e-186 657.1 514 70.0
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.5e-186 656.8 549 66.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-186 656.4 551 66.2
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.4e-184 650.2 517 68.5
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.5e-183 646.7 552 65.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 3.4e-183 645.6 547 65.3
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.4e-183 645.6 505 67.5
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 9.9e-183 644.0 516 68.2
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-182 643.7 553 66.0
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 3.8e-182 642.1 515 67.2
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 5.5e-181 638.3 515 67.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.7e-180 636.0 548 65.0
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.3e-179 632.9 552 65.2
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.6e-175 619.4 552 62.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 4.2e-173 612.1 500 67.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 2.7e-172 609.4 536 64.6
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.5e-172 609.0 547 62.9
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 7.4e-170 601.3 512 65.8
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 3.7e-169 599.0 552 61.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 6.3e-169 598.2 570 58.9
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.9e-167 591.7 512 65.2
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 6.5e-166 588.2 554 61.2
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.2e-164 583.9 651 54.8
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.0e-163 580.9 515 63.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.8e-163 580.1 518 62.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 6.7e-163 578.2 505 64.0
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.5e-162 576.2 513 62.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.3e-162 575.9 550 60.9
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.3e-162 575.9 513 63.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 9.7e-162 574.3 600 57.0
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 9.7e-162 574.3 600 57.0
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.5e-159 567.0 528 61.6
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.4e-157 560.5 519 61.1
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 4.2e-157 558.9 531 59.9
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.7e-155 551.6 498 61.4
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.5e-154 550.4 501 61.7
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.5e-150 535.0 481 62.4
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.4e-149 533.9 491 60.9
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.6e-148 530.4 509 59.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 7.0e-144 515.0 539 57.1
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-143 514.2 561 53.7
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 2.0e-143 513.5 531 56.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 2.2e-142 510.0 517 56.7
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.7e-140 502.3 511 56.9
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.2e-138 497.7 441 63.3
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 5.7e-138 495.4 503 56.1
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 5.5e-133 478.8 467 57.4
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.6e-132 477.2 509 54.4
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.4e-131 474.2 424 64.2
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.5e-130 470.7 412 65.0
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 3.4e-130 469.5 510 54.9
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 9.8e-130 468.0 552 52.2
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.1e-128 463.0 541 52.1
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 1.2e-124 451.1 501 54.3
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 5.2e-123 445.7 463 57.0
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.3e-121 441.0 504 52.0
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 3.9e-118 429.5 352 68.8
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 4.3e-117 426.0 490 52.4
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.6e-116 422.9 499 50.3
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.0e-115 421.4 511 50.1
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.4e-112 410.2 513 51.5
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.0e-110 403.3 517 49.9
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.5e-103 379.8 513 48.0
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 9.5e-101 371.7 509 47.0
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.5e-98 364.4 331 61.9
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 4.4e-98 362.8 545 43.7
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.4e-96 357.1 531 44.4
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.2e-89 334.0 308 60.4
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.7e-87 327.0 603 40.0
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.8e-84 317.0 564 38.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 6.2e-84 315.8 556 40.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.0e-83 312.0 226 68.1
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.5e-82 311.2 546 39.7
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.9e-80 304.3 444 43.5
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 9.3e-80 302.0 296 57.1
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.0e-65 255.4 236 61.0
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 7.1e-64 249.2 379 46.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 9.6e-61 238.8 512 33.0
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 4.2e-48 196.8 635 29.8
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.2e-42 178.7 385 35.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 7.7e-42 176.0 535 29.9
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 2.6e-37 161.0 141 62.4
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.1e-32 145.6 87 79.3
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 4.1e-27 127.1 135 56.3
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 4.0e-14 84.0 110 46.4
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.5e-10 70.5 53 62.3
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-08 65.9 49 63.3
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 5.2e-06 57.0 67 47.8


User provided reference genes

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