Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.9e-144 515.8 255 100.0
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.1e-127 459.1 255 88.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.4e-123 446.4 253 86.6
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.2e-122 443.4 253 86.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.6e-122 443.0 253 86.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 2.4e-110 402.5 255 77.3
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 5.3e-110 401.4 210 91.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 5.3e-110 401.4 254 78.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 2.0e-109 399.4 256 76.2
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.4e-109 398.7 255 75.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.5e-109 398.3 248 79.0
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 5.9e-109 397.9 256 78.1
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.4e-107 393.3 255 76.1
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 1.9e-107 392.9 256 79.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.2e-107 391.7 249 79.5
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.5e-107 391.3 255 74.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 2.7e-106 389.0 255 73.7
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.7e-106 389.0 255 73.7
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 6.1e-106 387.9 254 73.6
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 7.9e-106 387.5 251 74.1
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.0e-105 387.1 253 73.5
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.4e-105 386.7 256 74.2
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 2.3e-105 386.0 246 76.8
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 3.7e-103 378.6 249 75.1
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 4.8e-103 378.3 251 73.7
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.4e-102 376.7 205 87.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.4e-102 375.9 251 72.1
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 5.9e-101 371.3 252 74.6
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.9e-100 369.0 247 74.5
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 6.5e-100 367.9 252 73.8
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 6.5e-100 367.9 262 72.1
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.5e-100 367.5 252 73.0
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.1e-99 367.1 252 73.4
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.9e-99 366.3 248 73.0
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.5e-99 364.8 246 74.0
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.2e-98 363.6 247 72.9
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.2e-98 363.6 252 72.2
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.6e-98 363.2 258 71.3
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.6e-98 363.2 255 71.4
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 6.1e-98 361.3 259 70.3
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.0e-97 359.0 249 72.7
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 3.0e-97 359.0 249 72.3
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 6.7e-97 357.8 256 73.4
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 6.7e-97 357.8 251 70.1
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.5e-96 356.7 249 71.9
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 2.6e-96 355.9 253 69.2
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.3e-96 355.5 257 70.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.3e-96 355.5 257 70.0
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.7e-96 354.8 255 69.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.7e-96 354.0 255 69.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.2e-95 352.8 254 69.7
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 6.3e-95 351.3 249 72.3
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 8.2e-95 350.9 242 71.9
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 8.2e-95 350.9 207 78.7
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 2.4e-94 349.4 245 70.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 5.3e-94 348.2 231 72.3
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 5.3e-94 348.2 249 71.5
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 7.0e-94 347.8 248 69.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.2e-93 347.1 250 69.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 5.9e-93 344.7 248 70.6
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 5.9e-93 344.7 224 74.6
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 7.7e-93 344.4 249 69.9
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.0e-92 344.0 241 69.3
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.0e-92 344.0 241 69.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.0e-92 344.0 255 68.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.3e-92 343.6 246 69.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.7e-92 343.2 232 72.0
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 2.9e-92 342.4 248 68.5
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.8e-92 342.0 252 69.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 5.0e-92 341.7 254 69.7
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 6.5e-92 341.3 242 68.6
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 5.5e-91 338.2 202 77.7
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 9.4e-91 337.4 195 78.5
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 4.7e-90 335.1 255 66.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.2e-88 330.5 281 60.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 2.0e-88 329.7 230 68.7
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 9.7e-88 327.4 199 77.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 4.8e-87 325.1 206 76.2
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 6.3e-87 324.7 269 65.1
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 2.4e-86 322.8 272 65.1
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 3.1e-86 322.4 254 66.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 4.1e-86 322.0 188 79.8
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 7.0e-86 321.2 234 69.2
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 7.7e-85 317.8 183 79.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.7e-84 316.6 254 62.2
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.9e-84 315.8 255 63.1
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 4.2e-83 312.0 202 73.8
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 8.0e-82 307.8 182 79.1
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 1.8e-81 306.6 205 71.2
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 5.2e-81 305.1 180 79.4
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.2e-80 303.9 171 86.5
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.6e-80 302.8 169 81.7
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 3.4e-80 302.4 175 82.9
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.7e-80 301.6 197 72.6
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 2.8e-79 299.3 169 81.7
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 3.1e-78 295.8 252 60.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 6.6e-68 261.5 251 56.2
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.2e-66 257.3 254 53.9
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.8e-64 247.7 234 59.0
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.7e-63 246.9 191 65.4
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.3e-60 236.5 139 80.6
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 5.6e-59 231.9 269 47.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.0e-57 225.7 171 59.1
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.0e-56 223.4 251 47.0
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 6.2e-42 175.3 194 50.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 6.4e-39 165.2 129 65.1
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 2.7e-37 159.8 256 41.4
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 9.0e-25 118.2 63 87.3
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.5e-24 115.9 75 76.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.1e-22 111.3 59 86.4
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-22 110.5 84 65.5
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 4.2e-22 109.4 170 41.8
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 4.3e-11 72.8 62 51.6


User provided reference genes

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