Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 9.3e-173 610.1 316 100.0
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 9.8e-122 440.7 323 68.4
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 8.3e-121 437.6 323 68.1
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 7.0e-120 434.5 251 82.5
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.5e-119 431.8 323 66.3
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 6.2e-108 394.8 270 66.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 5.2e-107 391.7 270 66.3
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 2.4e-104 382.9 269 67.3
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 9.2e-104 380.9 278 66.5
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 3.5e-103 379.0 281 63.7
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.3e-102 377.1 271 66.4
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 8.6e-102 374.4 276 65.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 3.3e-101 372.5 271 63.5
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 2.8e-100 369.4 279 63.1
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 2.8e-100 369.4 269 63.2
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 2.3e-99 366.3 278 63.3
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 2.6e-98 362.8 279 62.4
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 5.8e-98 361.7 280 62.1
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 5.8e-98 361.7 269 65.8
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.3e-97 360.5 270 63.7
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 2.9e-97 359.4 271 63.8
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 4.9e-97 358.6 281 62.6
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 6.4e-97 358.2 275 63.6
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 5.4e-96 355.1 273 62.3
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 7.1e-96 354.8 273 59.7
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.7e-94 350.1 271 60.1
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.3e-94 349.7 267 63.3
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 2.3e-94 349.7 269 62.1
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 2.3e-94 349.7 270 60.7
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 3.0e-94 349.4 268 63.1
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 8.6e-94 347.8 270 63.7
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.2e-92 344.0 267 58.8
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-92 343.6 268 58.6
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 8.1e-92 341.3 266 58.6
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 8.1e-92 341.3 266 58.6
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.1e-91 340.9 277 59.6
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 1.4e-91 340.5 255 62.4
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.8e-91 340.1 270 61.9
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.8e-91 340.1 270 61.9
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 1.8e-91 340.1 272 58.5
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.8e-91 340.1 269 61.3
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 2.4e-91 339.7 294 57.5
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 4.0e-91 339.0 272 61.4
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 6.8e-91 338.2 267 58.8
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 8.9e-91 337.8 267 61.4
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 8.9e-91 337.8 267 61.4
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 8.9e-91 337.8 267 61.4
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.5e-90 337.0 277 58.1
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 3.4e-90 335.9 264 62.9
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 9.9e-90 334.3 267 61.0
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 1.7e-89 333.6 193 82.9
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 2.9e-89 332.8 271 60.9
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 3.8e-89 332.4 281 58.4
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.9e-89 332.0 277 59.2
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 6.4e-89 331.6 264 62.1
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 1.4e-88 330.5 271 60.5
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 2.4e-88 329.7 264 61.4
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 9.3e-88 327.8 280 57.9
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 9.3e-88 327.8 272 59.6
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.2e-87 327.4 264 60.2
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.2e-87 327.4 264 60.2
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-87 327.0 270 59.6
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 4.6e-87 325.5 281 58.0
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 4.6e-87 325.5 270 60.0
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 4.6e-87 325.5 272 61.0
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 6.0e-87 325.1 272 61.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 3.0e-86 322.8 294 55.4
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 3.0e-86 322.8 270 58.5
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 6.6e-86 321.6 262 60.3
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.5e-85 320.5 277 56.7
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 3.3e-85 319.3 282 56.0
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 3.3e-85 319.3 271 57.6
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 3.3e-85 319.3 271 58.3
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 5.6e-85 318.5 270 56.3
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.6e-84 317.0 270 56.3
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.1e-83 314.3 275 56.0
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 2.4e-83 313.2 280 53.6
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 9.0e-83 311.2 276 56.5
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 2.6e-82 309.7 267 55.1
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 5.8e-82 308.5 267 57.3
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 4.9e-81 305.4 272 57.0
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.9e-80 303.5 216 66.2
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 2.4e-80 303.1 249 58.6
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 3.2e-80 302.8 286 54.5
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 4.2e-80 302.4 250 59.6
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.7e-79 299.7 214 65.4
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 2.7e-79 299.7 283 54.4
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 6.0e-79 298.5 278 54.3
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 6.0e-79 298.5 280 52.1
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.3e-78 297.4 284 52.5
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.3e-78 296.6 265 54.3
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 1.5e-77 293.9 275 51.3
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 4.3e-77 292.4 245 59.6
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 5.6e-77 292.0 252 56.7
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.6e-76 290.4 259 55.2
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.8e-76 288.9 279 53.4
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 4.8e-76 288.9 248 56.0
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 6.2e-76 288.5 284 51.1
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 6.4e-73 278.5 250 55.6
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.4e-72 277.3 246 58.1
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 7.1e-72 275.0 303 47.9
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.3e-68 264.2 248 54.0
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 7.6e-66 255.0 266 48.9
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 1.4e-64 250.8 261 48.3
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 2.5e-64 250.0 277 49.1
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 5.5e-64 248.8 279 43.4
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 7.9e-63 245.0 270 43.3
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 5.7e-61 238.8 297 43.1
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.8e-60 236.5 336 39.6
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.7e-60 236.1 217 53.5
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.7e-60 236.1 217 53.5
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.0e-59 231.5 217 53.5
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.0e-59 231.5 217 53.5
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.2e-57 226.9 222 51.4
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.5e-56 223.4 195 56.9
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 4.3e-53 212.6 195 51.3
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.8e-52 209.9 270 44.1
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 4.8e-52 209.1 283 37.8
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 1.9e-48 197.2 212 48.1
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 5.5e-48 195.7 248 41.9
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.8e-43 180.6 123 69.1
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.0e-41 174.9 296 34.8
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 7.2e-40 168.7 134 61.9
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.6e-39 167.5 433 28.6
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.0e-38 164.9 170 51.8
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 4.4e-37 159.5 131 61.1
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 3.1e-35 153.3 353 31.7
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 5.0e-33 146.0 163 47.2
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.6e-31 141.0 304 30.6
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 2.1e-31 140.6 152 52.6
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 7.4e-29 132.1 388 25.8
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 1.7e-28 131.0 74 77.0
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 6.8e-22 109.0 156 40.4
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 1.2e-21 108.2 55 83.6
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 9.8e-21 105.1 168 39.3
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.8e-19 100.9 156 37.8
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.4e-19 100.5 64 68.8
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.7e-18 97.1 197 33.5
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 6.5e-17 92.4 144 40.3
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.9e-16 90.9 57 66.7
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 6.8e-14 82.4 50 68.0
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-10 71.2 93 41.9
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 2.5e-08 63.9 47 53.2
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 5.6e-08 62.8 40 60.0
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 1.2e-07 61.6 32 78.1
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.6e-07 60.1 41 63.4
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.0e-06 58.5 40 62.5
Haze_02522 Corylus avellana HOM05D004971 ORTHO05D006289 8.9e-06 55.5 87 35.6


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