Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G104100 Theobroma cacao HOM05D000361 ORTHO05D410111 5.4e-47 190.7 96 100.0
Thecc.02G000800 Theobroma cacao HOM05D000361 ORTHO05D008294 2.1e-14 82.4 53 84.9
Duzib132G1205 Durio zibethinus HOM05D000361 ORTHO05D008294 3.5e-14 81.6 53 84.9
COL.COLO4_25023 Corchorus olitorius HOM05D000361 ORTHO05D008294 1.7e-13 79.3 53 79.2
Gohir.D02G240100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 9.6e-12 73.6 54 79.6
Gohir.A03G218100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 2.1e-11 72.4 54 77.8
arahy.Tifrunner.gnm1.ann1.76Y6MV Arachis hypogaea HOM05D000361 ORTHO05D008294 5.8e-09 64.3 58 60.3
arahy.Tifrunner.gnm1.ann1.QR0DXW Arachis hypogaea HOM05D000361 ORTHO05D008294 5.8e-09 64.3 58 60.3
Ciclev10014269m.g Citrus clementina HOM05D000361 ORTHO05D008294 4.9e-08 61.2 56 55.4
Oeu039911.1 Olea europaea HOM05D000361 ORTHO05D008294 4.9e-08 61.2 56 60.7
Lj1C1152G4 Lonicera japonica HOM05D000361 ORTHO05D008294 1.9e-07 59.3 57 57.9
TWI63G1117 Tripterygium wilfordii HOM05D000361 ORTHO05D008294 4.2e-07 58.2 55 58.2
Ca_17753_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008294 9.3e-07 57.0 59 57.6
Lj6g0011881 Lotus japonicus HOM05D000361 ORTHO05D008294 9.3e-07 57.0 54 55.6
SalBow6G3398 Salvia bowleyana HOM05D000361 ORTHO05D008294 1.2e-06 56.6 55 56.4
Sc24g0002810 Simmondsia chinensis HOM05D000361 ORTHO05D008294 1.2e-06 56.6 57 57.9
Nn1g09868 Nelumbo nucifera HOM05D000361 ORTHO05D008294 2.1e-06 55.8 55 58.2
CAN.G809.9 Capsicum annuum HOM05D000361 ORTHO05D008294 2.7e-06 55.5 54 51.9
DCAR_003731 Daucus carota HOM05D000361 ORTHO05D008294 2.7e-06 55.5 57 57.9
Sabra01G0052300 Salix brachista HOM05D000361 ORTHO05D008294 2.7e-06 55.5 58 55.2
Cc09_g04600 Coffea canephora HOM05D000361 ORTHO05D008294 6.0e-06 54.3 57 52.6
Manes.16G060200 Manihot esculenta HOM05D000361 ORTHO05D008294 6.0e-06 54.3 58 53.4
Aqoxy1G01354 Aquilegia oxysepala HOM05D000361 ORTHO05D008294 7.8e-06 53.9 55 56.4
CSS0044464 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008294 7.8e-06 53.9 59 50.8
Nitab4.5_0001815g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008294 7.8e-06 53.9 55 52.7
Nitab4.5_0007687g0010 Nicotiana tabacum HOM05D000361 ORTHO05D008294 7.8e-06 53.9 55 52.7
Phvul.009G245600 Phaseolus vulgaris HOM05D000361 ORTHO05D008294 7.8e-06 53.9 54 55.6
VMungo1309G2334 Vigna mungo HOM05D000361 ORTHO05D008294 7.8e-06 53.9 54 55.6


User provided reference genes

Program Settings