Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G089300 Theobroma cacao HOM05D007990 ORTHO05D009984 4.5e-101 371.3 197 100.0
Duzib168G0718 Durio zibethinus HOM05D007990 ORTHO05D009984 5.8e-64 248.1 193 74.6
Gohir.A06G072600 Gossypium hirsutum HOM05D007990 ORTHO05D009984 1.3e-52 210.3 189 65.6
COL.COLO4_18199 Corchorus olitorius HOM05D007990 ORTHO05D009984 1.9e-51 206.5 194 64.9
Gohir.A07G011300 Gossypium hirsutum HOM05D007990 ORTHO05D009984 1.2e-45 187.2 189 64.6
Gohir.D07G011200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 7.9e-45 184.5 189 64.0
Gorai.001G011900 Gossypium raimondii HOM05D007990 ORTHO05D009984 7.9e-45 184.5 189 64.0
Gohir.D06G071200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 4.3e-43 178.7 160 68.1
Gorai.010G083000 Gossypium raimondii HOM05D007990 ORTHO05D009984 1.6e-42 176.8 158 68.4
CiPaw.03G215900 Carya illinoinensis HOM05D007990 ORTHO05D009984 1.4e-25 120.6 168 48.8
TWI32G0510 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 5.0e-23 112.1 195 44.1
Hma1.2p1_0798F.1_g219830 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 6.5e-23 111.7 205 45.4
TWI63G1466 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 1.1e-22 110.9 195 43.6
MELO3C004625.2 Cucumis melo HOM05D007990 ORTHO05D009984 1.4e-22 110.5 171 42.7
Ciclev10010560m.g Citrus clementina HOM05D007990 ORTHO05D009984 4.2e-22 109.0 204 44.1
Dinv36767 Davidia involucrata HOM05D007990 ORTHO05D009984 4.2e-22 109.0 200 45.0
ClCG11G001750 Citrullus lanatus HOM05D007990 ORTHO05D009984 1.6e-21 107.1 160 45.0
CsaV3_2G001460 Cucumis sativus L. HOM05D007990 ORTHO05D009984 6.1e-21 105.1 164 45.1
Manes.03G033800 Manihot esculenta HOM05D007990 ORTHO05D009984 3.9e-20 102.4 165 46.7
Sed0000223 Sechium edule HOM05D007990 ORTHO05D009984 2.0e-19 100.1 152 44.7
Atru.chr7.1590 Acer truncatum HOM05D007990 ORTHO05D009984 3.3e-19 99.4 177 43.5
Hma1.2p1_2664F.1_g326450 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 3.3e-19 99.4 135 54.1
Cc06_g11410 Coffea canephora HOM05D007990 ORTHO05D009984 5.3e-17 92.0 161 41.6
Haze_25914 Corylus avellana HOM05D007990 ORTHO05D009984 1.5e-16 90.5 170 42.4
Actinidia29902 Actinidia chinensis HOM05D007990 ORTHO05D009984 2.6e-16 89.7 138 48.6
Nitab4.5_0004526g0040 Nicotiana tabacum HOM05D007990 ORTHO05D009984 3.5e-16 89.4 163 42.9
AL8G32730 Arabidopsis lyrata HOM05D007990 ORTHO05D009984 7.7e-16 88.2 137 43.1
AT5G56880 Arabidopsis thaliana HOM05D007990 ORTHO05D009984 2.9e-15 86.3 137 42.3
Nitab4.5_0006552g0010 Nicotiana tabacum HOM05D007990 ORTHO05D009984 6.5e-15 85.1 163 41.7
CARHR270630 Cardamine hirsuta HOM05D007990 ORTHO05D009984 1.5e-14 84.0 158 37.3
Cfa003085 Carpinus fangiana HOM05D007990 ORTHO05D009984 1.5e-14 84.0 171 42.7
Carub.0008s1734 Capsella rubella HOM05D007990 ORTHO05D009984 2.5e-14 83.2 148 41.2
THA.LOC104813262 Tarenaya hassleriana HOM05D007990 ORTHO05D009984 3.2e-14 82.8 191 39.3
Prupe.7G209700 Prunus persica HOM05D007990 ORTHO05D009984 4.2e-14 82.4 174 41.4
Rhsim03G0232200 Rhododendron simsii HOM05D007990 ORTHO05D009984 1.2e-13 80.9 222 37.4
SGA_v2.0_scaffold62G21609 Striga asiatica HOM05D007990 ORTHO05D009984 1.2e-13 80.9 94 51.1
Thhalv10015576m.g Eutrema salsugineum HOM05D007990 ORTHO05D009984 2.1e-13 80.1 185 35.7
Oeu041221.1 Olea europaea HOM05D007990 ORTHO05D009984 2.1e-13 80.1 132 42.4
A03p13100 Brassica napus HOM05D007990 ORTHO05D009984 4.7e-13 79.0 145 40.7
BraA03t10620Z Brassica rapa HOM05D007990 ORTHO05D009984 4.7e-13 79.0 145 40.7
BolC3t13974H Brassica oleracea HOM05D007990 ORTHO05D009984 1.0e-12 77.8 138 42.0
Sp6g18600 Schrenkiella parvula HOM05D007990 ORTHO05D009984 1.0e-12 77.8 185 36.2
C09p48510 Brassica napus HOM05D007990 ORTHO05D009984 3.9e-12 75.9 166 34.9
BcaC04g20046 Brassica carinata HOM05D007990 ORTHO05D009984 6.7e-12 75.1 167 35.3
BolC9t57693H Brassica oleracea HOM05D007990 ORTHO05D009984 6.7e-12 75.1 167 35.3
FvH4_1g07430 Fragaria vesca HOM05D023113 ORTHO05D009984 2.6e-11 73.2 155 38.7
QL02p062610 Quercus lobata HOM05D007990 ORTHO05D009984 2.6e-11 73.2 195 37.9
FAN19G1041 Fragaria x ananassa HOM05D023113 ORTHO05D009984 3.3e-11 72.8 152 39.5
BcaB01g04425 Brassica carinata HOM05D007990 ORTHO05D009984 4.4e-11 72.4 184 34.2
C03p15320 Brassica napus HOM05D007990 ORTHO05D009984 4.4e-11 72.4 168 38.1
Migut.J00619 Erythranthe guttata HOM05D007990 ORTHO05D009984 4.4e-11 72.4 162 42.6
THA.LOC104817754 Tarenaya hassleriana HOM05D007990 ORTHO05D009984 4.4e-11 72.4 113 44.2
BcaB08g36048 Brassica carinata HOM05D007990 ORTHO05D009984 7.4e-11 71.6 185 33.5
FAN26G2796 Fragaria x ananassa HOM05D023113 ORTHO05D009984 7.4e-11 71.6 150 39.3
FAN28G0129 Fragaria x ananassa HOM05D023113 ORTHO05D009984 7.4e-11 71.6 150 39.3
Lj7P676T16 Lonicera japonica HOM05D007990 ORTHO05D009984 7.4e-11 71.6 204 34.3
Lj4g0018248 Lotus japonicus HOM05D007990 ORTHO05D009984 7.4e-11 71.6 49 73.5
Sc18g0001980 Simmondsia chinensis HOM05D007990 ORTHO05D009984 2.2e-10 70.1 136 41.2
FAN26G0609 Fragaria x ananassa HOM05D023113 ORTHO05D009984 3.7e-10 69.3 150 38.7
CANSAT56G4255 Cannabis sativa HOM05D007990 ORTHO05D009984 4.8e-10 68.9 197 36.5
Lsat_1_v5_gn_5_142501 Lactuca sativa HOM05D007990 ORTHO05D009984 6.3e-10 68.6 167 35.3
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.1e-09 67.8 47 74.5
Ah.09g228280 Amaranthus hybridus HOM05D007990 ORTHO05D009984 1.4e-09 67.4 138 42.0
Ca_21278_v3 Cicer arietinum L. HOM05D007990 ORTHO05D009984 1.4e-09 67.4 47 70.2
C09p48480 Brassica napus HOM05D007990 ORTHO05D009984 1.8e-09 67.0 123 37.4
HanXRQChr10g0319321 Helianthus annuus HOM05D007990 ORTHO05D009984 3.1e-09 66.2 169 34.9
BcaC04g20048 Brassica carinata HOM05D007990 ORTHO05D009984 5.3e-09 65.5 88 44.3
BolC9t57691H Brassica oleracea HOM05D007990 ORTHO05D009984 5.3e-09 65.5 88 44.3
Medtr4g126310 Medicago truncatula HOM05D007990 ORTHO05D009984 5.3e-09 65.5 102 42.2
DCAR_028590 Daucus carota HOM05D007990 ORTHO05D009984 1.6e-08 63.9 176 36.9
MD02G1079500 Malus domestica HOM05D007990 ORTHO05D009984 2.0e-08 63.5 220 31.4
AUR62027510 Chenopodium quinoa HOM05D007990 ORTHO05D009984 1.0e-07 61.2 105 41.9
DCAR_032237 Daucus carota HOM05D007990 ORTHO05D009984 1.0e-07 61.2 160 39.4
TAR383G0124 Trochodendron aralioides HOM05D009710 ORTHO05D011230 1.3e-07 60.8 110 40.9
MD15G1207000 Malus domestica HOM05D007990 ORTHO05D009984 1.7e-07 60.5 223 33.2
HanXRQChr12g0354891 Helianthus annuus HOM05D007990 ORTHO05D009984 8.5e-07 58.2 146 34.9


User provided reference genes

Program Settings