Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 4.7e-211 737.6 386 100.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.1e-191 673.3 390 91.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.0e-185 652.5 386 89.6
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.6e-185 652.1 386 89.4
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.4e-184 647.1 386 88.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.5e-174 615.1 388 85.8
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.0e-174 614.4 388 85.6
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.5e-172 609.0 382 85.6
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 9.0e-170 600.5 388 81.2
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.0e-169 599.4 387 80.9
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 3.4e-169 598.6 393 77.4
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.6e-169 597.4 387 80.1
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.4e-167 593.2 367 85.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.5e-167 591.3 388 80.7
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.6e-166 589.7 385 81.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.6e-166 589.7 385 81.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.8e-165 586.3 370 84.1
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.1e-164 583.6 375 81.9
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.5e-164 583.2 388 79.6
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.9e-164 582.8 370 83.2
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.5e-164 582.4 368 81.8
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.5e-164 582.4 367 83.7
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 7.4e-164 580.9 372 81.5
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 9.7e-164 580.5 388 80.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.3e-163 580.1 399 76.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.3e-163 580.1 385 81.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.8e-163 578.9 390 77.9
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.8e-163 578.2 385 80.5
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 4.8e-163 578.2 360 83.6
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 8.2e-163 577.4 386 79.8
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.4e-162 576.6 357 84.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.4e-162 576.6 385 80.8
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.4e-162 576.6 347 85.6
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.4e-162 576.6 353 83.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.4e-162 576.6 347 84.7
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.8e-162 576.2 389 79.4
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.4e-162 575.9 379 81.0
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 3.1e-162 575.5 366 83.3
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 6.9e-162 574.3 377 80.9
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 9.1e-162 573.9 377 81.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 9.1e-162 573.9 372 81.5
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.2e-161 573.5 336 86.3
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.5e-161 573.2 382 80.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-161 573.2 376 80.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.0e-161 572.8 359 83.0
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.6e-161 572.4 336 86.3
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.4e-161 572.0 361 83.1
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 4.5e-161 571.6 381 80.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.5e-161 571.6 359 83.3
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.9e-161 571.2 377 80.4
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.7e-161 570.9 407 76.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.0e-160 570.5 388 77.3
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.0e-160 570.5 377 77.2
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.3e-160 570.1 362 83.1
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.3e-160 570.1 362 83.1
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.3e-160 570.1 407 76.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.7e-160 569.7 354 85.0
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.2e-160 569.3 380 79.7
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.2e-160 569.3 378 78.3
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 2.2e-160 569.3 362 83.4
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.9e-160 568.9 385 75.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.9e-160 568.9 392 78.3
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.9e-160 568.9 378 75.1
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.0e-160 568.2 359 82.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.5e-159 565.8 361 80.9
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.5e-159 565.8 377 75.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 3.2e-159 565.5 384 80.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.2e-159 565.1 386 73.6
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 7.2e-159 564.3 384 74.5
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 9.4e-159 563.9 387 77.0
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 2.1e-158 562.8 408 73.3
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.6e-158 561.6 377 76.7
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 7.9e-158 560.8 362 82.3
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.4e-157 560.1 375 76.3
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.8e-157 559.7 372 77.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.8e-157 559.7 343 82.8
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.0e-157 558.9 388 74.2
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.9e-157 558.5 367 81.2
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.9e-157 558.5 359 80.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 3.9e-157 558.5 325 84.3
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 5.1e-157 558.1 368 77.4
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 5.1e-157 558.1 357 78.2
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-156 557.0 371 79.2
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.1e-156 557.0 373 79.1
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.5e-156 556.6 408 75.0
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 2.6e-156 555.8 362 81.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 2.6e-156 555.8 362 81.8
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.3e-156 555.4 376 76.9
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.3e-156 555.4 357 79.8
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.3e-156 555.4 320 84.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 4.4e-156 555.1 340 84.7
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 5.7e-156 554.7 381 75.3
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 7.4e-156 554.3 384 73.4
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 9.7e-156 553.9 384 73.2
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.2e-155 552.7 384 76.3
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.2e-155 552.7 389 72.2
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.7e-155 552.0 388 72.9
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 5.3e-154 548.1 373 76.9
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.2e-153 547.0 388 72.7
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.6e-153 545.8 373 77.2
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.7e-152 543.1 356 76.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 3.8e-152 542.0 359 77.2
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 5.0e-152 541.6 477 63.7
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 5.0e-152 541.6 408 68.9
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.5e-152 541.2 363 82.1
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 6.5e-152 541.2 366 76.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.1e-151 540.4 366 75.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.1e-151 540.4 390 76.9
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 9.4e-151 537.3 390 72.1
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.2e-150 537.0 356 75.8
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.1e-150 534.6 345 79.1
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.0e-149 533.9 384 74.2
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.4e-149 533.5 355 76.6
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.8e-149 533.1 313 83.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.8e-149 533.1 353 75.4
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.7e-149 531.2 346 78.0
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.8e-146 523.1 354 77.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 5.3e-146 521.5 387 73.9
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 5.3e-146 521.5 327 78.3
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 9.1e-146 520.8 356 73.0
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.3e-144 516.9 356 77.5
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 5.0e-144 515.0 361 72.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.5e-143 512.7 367 71.4
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 3.2e-143 512.3 349 74.5
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.3e-141 506.1 387 72.6
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.2e-140 503.8 296 82.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.8e-138 496.5 296 86.8
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.6e-137 493.4 316 83.2
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 7.7e-137 491.1 269 86.2
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 5.0e-136 488.4 388 69.1
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 5.5e-135 485.0 393 65.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.4e-132 475.3 358 71.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.8e-131 472.6 399 66.2
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 7.0e-130 468.0 322 74.8
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.3e-128 463.0 323 67.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 5.0e-128 461.8 291 77.3
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.6e-126 456.8 334 65.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.0e-125 452.2 266 83.5
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.8e-122 443.4 329 64.7
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 5.4e-122 441.8 330 63.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 7.8e-121 438.0 323 65.0
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.8e-120 435.6 363 65.0
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 9.5e-119 431.0 309 66.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.0e-116 423.3 361 63.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.6e-113 413.7 328 61.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 3.0e-112 409.5 409 56.7
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.6e-110 403.7 221 89.1
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.6e-110 402.5 373 63.0
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.1e-101 372.9 238 78.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 8.1e-94 348.2 299 57.9
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.6e-86 323.9 256 63.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.2e-84 317.8 202 81.7
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.4e-69 267.7 150 84.7
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 6.2e-62 242.3 169 77.5
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.0e-60 237.3 356 44.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.4e-58 231.1 188 62.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 3.4e-44 183.3 172 57.6
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.2e-33 148.3 95 80.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.3e-30 136.0 281 32.7
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 5.9e-28 129.4 105 63.8
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.2e-26 123.2 90 85.6
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.4e-24 118.2 335 29.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 3.0e-24 117.1 65 81.5
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 8.8e-24 115.5 299 27.8
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.2e-23 115.2 80 80.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 7.0e-21 105.9 89 76.4
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.5e-20 103.2 245 35.1
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 7.7e-20 102.4 377 26.5
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 5.5e-18 96.3 67 76.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 5.5e-18 96.3 67 76.1
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.1e-17 94.4 67 76.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-15 88.6 59 71.2
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.1e-10 72.0 108 34.3
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 1.2e-09 68.6 71 70.4
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 2.8e-09 67.4 49 65.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 4.7e-09 66.6 33 87.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.8e-08 64.7 41 75.6
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 3.0e-08 63.9 41 73.2
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 5.2e-08 63.2 39 76.9


User provided reference genes

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