Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G068100 Theobroma cacao HOM05D012808 ORTHO05D011121 2.6e-244 848.2 406 100.0
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 2.4e-27 127.5 290 30.7
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.4e-19 101.7 166 30.7
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.2e-16 90.1 165 26.7
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-14 85.1 160 30.0
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.3e-14 84.3 139 30.9
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.0e-14 84.0 157 26.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.5e-13 81.6 157 26.1
Sc10g0009390 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.9e-13 81.3 190 26.8
Gohir.A01G136601 Gossypium hirsutum HOM05D000003 ORTHO05D015081 5.6e-13 79.7 112 31.2
Medtr1g033680 Medicago truncatula HOM05D002777 ORTHO05D001516 5.6e-13 79.7 164 23.8
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.4e-13 79.3 170 24.7
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 9.6e-13 79.0 293 21.8
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.3e-12 78.6 293 21.8
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-12 78.6 157 27.4
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 2.1e-12 77.8 134 31.3
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 6.2e-12 76.3 157 25.5
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 6.2e-12 76.3 172 27.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.4e-11 75.1 161 28.0
Lj2g0009215 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-11 75.1 151 29.1
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-11 74.7 257 26.5
EL10Ac2g04475 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-11 73.9 185 24.3
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-11 73.9 266 25.2
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.0e-11 73.6 190 23.7
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-11 73.6 129 30.2
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.0e-11 73.6 125 31.2
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 5.3e-11 73.2 246 21.5
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 5.3e-11 73.2 129 30.2
Gorai.002G084400 Gossypium raimondii HOM05D000003 ORTHO05D015081 6.9e-11 72.8 121 32.2
EL10Ac5g12223 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-10 72.0 213 26.3
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 1.5e-10 71.6 272 24.6
Thecc.10G105000 Theobroma cacao HOM05D012808 ORTHO05D011705 1.5e-10 71.6 97 37.1
Gorai.007G194800 Gossypium raimondii HOM05D049450 ORTHO05D009356 2.0e-10 71.2 129 30.2
Gohir.D11G182850 Gossypium hirsutum HOM05D049450 ORTHO05D015081 2.6e-10 70.9 128 30.5
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.5e-10 70.1 122 29.5
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 4.5e-10 70.1 117 28.2
EL10Ac1g01107 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-10 69.7 158 28.5
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 5.8e-10 69.7 159 21.4
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 5.8e-10 69.7 192 24.5
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 5.8e-10 69.7 156 28.2
Lj6g0021963 Lotus japonicus HOM05D002777 ORTHO05D001516 7.6e-10 69.3 164 28.7
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-09 68.9 131 28.2
EL10Ac1g02070 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-09 68.6 152 29.6
EL10Ac4g08137 Beta vulgaris HOM05D008976 ORTHO05D011121 1.7e-09 68.2 225 23.6
Sc16g0001350 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.7e-09 68.2 95 34.7
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-09 67.8 127 26.8
Lj4g0007213 Lotus japonicus HOM05D002777 ORTHO05D001516 2.9e-09 67.4 149 26.2
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 2.9e-09 67.4 116 31.9
Gohir.A08G172175 Gossypium hirsutum HOM05D000003 ORTHO05D015081 3.8e-09 67.0 103 26.2
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 3.8e-09 67.0 200 24.5
Lj3g0009896 Lotus japonicus HOM05D002777 ORTHO05D001516 4.9e-09 66.6 150 26.0
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 6.5e-09 66.2 120 25.8
Lj5g0007060 Lotus japonicus HOM05D002777 ORTHO05D001516 6.5e-09 66.2 149 25.5
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 8.4e-09 65.9 140 27.9
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 8.4e-09 65.9 219 23.7
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-08 65.5 156 25.0
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-08 65.5 156 25.0
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 1.1e-08 65.5 69 42.0
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-08 65.1 142 26.8
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-08 64.3 139 25.2
EL10Ac8g19650 Beta vulgaris HOM05D000992 ORTHO05D006704 2.5e-08 64.3 147 27.2
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.5e-08 64.3 133 24.1
EL10Ac1g01108 Beta vulgaris HOM05D008976 ORTHO05D011121 3.2e-08 63.9 128 28.9
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-08 63.9 156 25.6
Phvul.007G108700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-08 63.9 134 29.1
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.2e-08 63.5 140 24.3
Gorai.009G210100 Gossypium raimondii HOM05D019814 ORTHO05D025702 4.2e-08 63.5 113 29.2
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 4.2e-08 63.5 167 28.1
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 5.5e-08 63.2 117 27.4
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 5.5e-08 63.2 132 29.5
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 7.1e-08 62.8 149 30.2
DCAR_030266 Daucus carota HOM05D012331 ORTHO05D004468 9.3e-08 62.4 189 26.5
EL10Ac6g14951 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-07 62.0 267 22.5
DCAR_005094 Daucus carota HOM05D012331 ORTHO05D004468 1.2e-07 62.0 140 27.1
Phvul.010G072600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-07 62.0 128 28.9
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-07 61.6 201 22.4
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-07 61.6 119 28.6
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.6e-07 61.6 167 25.1
EL10Ac5g10790 Beta vulgaris HOM05D008976 ORTHO05D011121 2.1e-07 61.2 247 23.1
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.7e-07 60.8 97 32.0
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.7e-07 60.8 132 22.7
CSS0028826 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.6e-07 60.1 196 24.5
Lj2g0003501 Lotus japonicus HOM05D002777 ORTHO05D001516 4.6e-07 60.1 155 25.8
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 4.6e-07 60.1 110 29.1
Lj6g0012166 Lotus japonicus HOM05D002777 ORTHO05D001516 7.9e-07 59.3 160 23.8
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.9e-07 59.3 236 21.2
Sc25g0000230 Simmondsia chinensis HOM05D011136 ORTHO05D010856 7.9e-07 59.3 165 23.0
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.3e-06 58.5 96 33.3
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-06 58.5 198 27.8
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.3e-06 58.5 144 25.7
Phvul.002G096200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 58.5 122 29.5
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 58.5 124 22.6
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.3e-06 58.5 146 25.3
TPR.G14641 Trifolium pratense HOM05D002777 ORTHO05D001516 1.3e-06 58.5 185 25.4
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 58.2 136 20.6
vmacro11925 Vaccinium macrocarpon HOM05D000203 ORTHO05D009356 1.8e-06 58.2 76 32.9
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 2.3e-06 57.8 135 25.2
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 57.8 169 23.7
Thecc.09G145500 Theobroma cacao HOM05D044484 ORTHO05D051437 2.3e-06 57.8 94 31.9
DCAR_030268 Daucus carota HOM05D012331 ORTHO05D004468 3.0e-06 57.4 189 25.9
Phvul.002G217700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.0e-06 57.4 128 30.5
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 3.9e-06 57.0 64 42.2
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 3.9e-06 57.0 100 25.0
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 3.9e-06 57.0 152 21.1
Sc03g0004340 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.9e-06 57.0 145 22.8
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.9e-06 57.0 112 26.8
Sc16g0001340 Simmondsia chinensis HOM05D009348 ORTHO05D010856 6.7e-06 56.2 117 25.6
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 8.7e-06 55.8 156 19.9
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 8.7e-06 55.8 166 21.7
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 8.7e-06 55.8 191 20.9


User provided reference genes

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