Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 2.2e-43 178.7 101 100.0
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 4.8e-38 161.0 102 90.2
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 5.0e-35 151.0 101 84.2
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.0e-35 151.0 106 83.0
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 8.4e-35 150.2 101 84.2
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 1.9e-34 149.1 106 82.1
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.1e-31 139.8 112 74.1
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 4.2e-26 121.3 103 69.9
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 6.1e-25 117.5 103 67.0
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.3e-24 115.5 103 66.0
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 3.9e-24 114.8 101 68.3
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 3.3e-23 111.7 101 65.3
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 1.8e-21 105.9 95 67.4
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.2e-20 103.2 101 62.4
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 2.6e-20 102.1 101 62.4
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 3.8e-19 98.2 95 65.3
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 6.5e-19 97.4 98 63.3
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 7.2e-18 94.0 102 59.8
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.2e-17 93.2 103 57.3
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.7e-17 92.0 101 60.4
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 1.1e-15 86.7 102 55.9
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 2.0e-15 85.9 101 56.4
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 2.0e-15 85.9 101 55.4
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 4.4e-15 84.7 103 57.3
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 9.7e-15 83.6 103 56.3
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 9.7e-15 83.6 95 57.9
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 1.7e-14 82.8 95 54.7
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 2.8e-14 82.0 99 50.5
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 2.8e-14 82.0 105 55.2
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 4.8e-14 81.3 104 54.8
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 1.1e-13 80.1 98 54.1
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 1.1e-13 80.1 101 51.5
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 1.1e-13 80.1 101 51.5
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 1.4e-13 79.7 106 54.7
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 1.4e-13 79.7 105 54.3
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 1.8e-13 79.3 101 53.5
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 2.4e-13 79.0 102 51.0
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 3.1e-13 78.6 106 51.9
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 4.1e-13 78.2 102 53.9
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 4.1e-13 78.2 102 52.9
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 5.3e-13 77.8 99 53.5
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 5.3e-13 77.8 102 59.8
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 9.1e-13 77.0 104 49.0
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 9.1e-13 77.0 101 49.5
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.2e-12 76.6 99 53.5
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.2e-12 76.6 101 53.5
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 1.2e-12 76.6 93 53.8
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.6e-12 76.3 95 56.8
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 1.6e-12 76.3 101 53.5
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 2.0e-12 75.9 102 53.9
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 2.6e-12 75.5 100 53.0
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 3.5e-12 75.1 57 64.9
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 3.5e-12 75.1 91 52.7
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 4.5e-12 74.7 96 54.2
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 4.5e-12 74.7 102 52.9
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 4.5e-12 74.7 101 51.5
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 4.5e-12 74.7 101 48.5
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 5.9e-12 74.3 99 53.5
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 7.7e-12 73.9 102 54.9
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 1.0e-11 73.6 98 51.0
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.3e-11 73.2 95 47.4
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 1.7e-11 72.8 109 49.5
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 2.2e-11 72.4 96 50.0
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 2.9e-11 72.0 96 53.1
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 3.8e-11 71.6 104 52.9
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 3.8e-11 71.6 102 51.0
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 3.8e-11 71.6 95 54.7
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 3.8e-11 71.6 60 63.3
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 3.8e-11 71.6 64 59.4
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 3.8e-11 71.6 102 52.0
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 5.0e-11 71.2 101 46.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 6.5e-11 70.9 102 52.0
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 6.5e-11 70.9 101 54.5
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 6.5e-11 70.9 101 51.5
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 6.5e-11 70.9 96 50.0
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 8.5e-11 70.5 96 52.1
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.5e-10 69.7 95 54.7
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 1.9e-10 69.3 94 47.9
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 1.9e-10 69.3 100 50.0
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 4.2e-10 68.2 100 49.0
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 7.2e-10 67.4 94 48.9
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 1.2e-09 66.6 92 46.7
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.6e-09 66.2 54 64.8
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 2.7e-09 65.5 98 46.9
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 4.7e-09 64.7 95 49.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 6.1e-09 64.3 87 49.4
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 8.0e-09 63.9 52 65.4
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 1.0e-08 63.5 95 50.5
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.8e-08 62.8 101 42.6
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 2.3e-08 62.4 95 48.4
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 2.3e-08 62.4 95 48.4
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 2.3e-08 62.4 78 46.2
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 3.0e-08 62.0 96 45.8
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 4.0e-08 61.6 96 45.8
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 4.0e-08 61.6 96 45.8
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 4.0e-08 61.6 74 50.0
GSVIVG01031965001 Vitis vinifera HOM05D006766 ORTHO05D008534 4.0e-08 61.6 77 49.4
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 6.7e-08 60.8 62 59.7
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 6.7e-08 60.8 96 45.8
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 6.7e-08 60.8 96 45.8
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 8.8e-08 60.5 56 53.6
COL.COLO4_25930 Corchorus olitorius HOM05D006766 ORTHO05D008534 8.8e-08 60.5 79 46.8
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 1.1e-07 60.1 87 52.9
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 1.1e-07 60.1 75 46.7
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 1.1e-07 60.1 94 47.9
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 2.0e-07 59.3 83 49.4
Sed0007595 Sechium edule HOM05D006766 ORTHO05D008534 2.6e-07 58.9 98 41.8
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 3.3e-07 58.5 101 41.6
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 3.3e-07 58.5 97 40.2
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 7.5e-07 57.4 48 58.3
FvH4_2g08780 Fragaria vesca HOM05D006766 ORTHO05D008534 7.5e-07 57.4 74 50.0
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 9.7e-07 57.0 69 46.4
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.3e-06 56.6 100 39.0
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 1.3e-06 56.6 49 53.1
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.3e-06 56.6 63 49.2
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 1.7e-06 56.2 64 48.4
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 1.7e-06 56.2 60 53.3
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.7e-06 56.2 59 50.8
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 1.7e-06 56.2 59 50.8
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 1.7e-06 56.2 60 53.3
Carub.0007s0121 Capsella rubella HOM05D006766 ORTHO05D008534 1.7e-06 56.2 78 46.2
Gohir.D02G215600 Gossypium hirsutum HOM05D006766 ORTHO05D008534 1.7e-06 56.2 83 43.4
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 1.7e-06 56.2 100 40.0
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 1.7e-06 56.2 86 46.5
Aqoxy5G01642 Aquilegia oxysepala HOM05D006766 ORTHO05D008534 2.2e-06 55.8 83 41.0
FAN15G0619 Fragaria x ananassa HOM05D006766 ORTHO05D008534 2.2e-06 55.8 76 48.7
PSO541G0900 Papaver somniferum HOM05D006766 ORTHO05D008534 2.2e-06 55.8 66 47.0
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 2.2e-06 55.8 100 41.0
TAR625G1191 Trochodendron aralioides HOM05D006766 ORTHO05D008534 2.2e-06 55.8 69 46.4
AL7G11290 Arabidopsis lyrata HOM05D006766 ORTHO05D008534 2.8e-06 55.5 68 48.5
CSS0023455 Camellia sinensis var. sinensis HOM05D006766 ORTHO05D008534 2.8e-06 55.5 91 42.9
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 2.8e-06 55.5 67 50.7
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 3.7e-06 55.1 48 56.2
Gohir.A12G028700 Gossypium hirsutum HOM05D006766 ORTHO05D008534 3.7e-06 55.1 56 51.8
Gohir.D12G028200 Gossypium hirsutum HOM05D006766 ORTHO05D008534 3.7e-06 55.1 56 51.8
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 3.7e-06 55.1 95 50.5
PSO144G0109 Papaver somniferum HOM05D006766 ORTHO05D008534 3.7e-06 55.1 68 47.1
PSO144G0117 Papaver somniferum HOM05D006766 ORTHO05D008534 3.7e-06 55.1 68 47.1
Thecc.02G085300 Theobroma cacao HOM05D006766 ORTHO05D008534 3.7e-06 55.1 91 40.7
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 4.8e-06 54.7 59 50.8
Cfa005004 Carpinus fangiana HOM05D006766 ORTHO05D008534 4.8e-06 54.7 54 53.7
CiPaw.05G064400 Carya illinoinensis HOM05D006766 ORTHO05D008534 4.8e-06 54.7 81 43.2
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 4.8e-06 54.7 84 41.7
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 4.8e-06 54.7 96 40.6
Gorai.008G028800 Gossypium raimondii HOM05D006766 ORTHO05D008534 4.8e-06 54.7 55 50.9
CSS0001017 Camellia sinensis var. sinensis HOM05D006766 ORTHO05D008534 6.3e-06 54.3 91 42.9
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 6.3e-06 54.3 60 55.0
ECA234G2659 Erigeron canadensis HOM05D006766 ORTHO05D008534 6.3e-06 54.3 93 39.8
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 6.3e-06 54.3 63 47.6
Rhsim11G0177000 Rhododendron simsii HOM05D006766 ORTHO05D008534 6.3e-06 54.3 81 44.4
Sp7g36570 Schrenkiella parvula HOM05D006766 ORTHO05D008534 6.3e-06 54.3 68 48.5
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 6.3e-06 54.3 56 48.2
Sc18g0004470 Simmondsia chinensis HOM05D006766 ORTHO05D008534 6.3e-06 54.3 70 47.1
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 6.3e-06 54.3 97 34.0
CDE12G0636 Ceratophyllum demersum HOM05D006762 ORTHO05D003505 8.2e-06 53.9 92 42.4
Haze_02383 Corylus avellana HOM05D001555 ORTHO05D001616 8.2e-06 53.9 67 46.3
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 8.2e-06 53.9 48 54.2
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.2e-06 53.9 103 42.7
Prupe.8G097200 Prunus persica HOM05D006766 ORTHO05D008534 8.2e-06 53.9 72 43.1
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 8.2e-06 53.9 48 54.2
vmacro02108 Vaccinium macrocarpon HOM05D006766 ORTHO05D008534 8.2e-06 53.9 87 41.4


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