Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 2.1e-166 589.0 295 100.0
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.9e-127 459.5 296 77.0
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 6.8e-125 451.1 296 76.0
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 6.8e-125 451.1 297 76.1
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.1e-114 417.2 274 74.5
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.6e-97 360.1 231 77.5
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 5.4e-90 335.1 301 57.5
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.0e-88 330.9 289 58.1
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 5.1e-88 328.6 302 57.0
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.1e-87 327.4 318 52.2
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.9e-87 326.6 277 57.4
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 3.1e-85 319.3 311 55.3
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 6.8e-85 318.2 292 55.1
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.1e-81 306.6 303 51.2
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 5.6e-79 298.5 302 51.7
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 7.6e-76 288.1 297 51.9
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.2e-75 286.6 292 52.1
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 8.4e-75 284.6 297 50.5
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 5.4e-74 282.0 272 53.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 3.5e-73 279.3 297 49.8
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.0e-72 277.7 297 50.5
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.3e-72 277.3 270 54.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.5e-71 273.9 293 50.2
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 4.3e-71 272.3 294 50.7
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 3.1e-69 266.2 297 46.5
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.7e-67 260.4 368 41.0
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 1.4e-66 257.3 297 45.8
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 2.3e-64 250.0 294 46.3
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.5e-63 246.5 224 52.7
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.3e-62 244.2 292 43.5
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.3e-62 244.2 303 44.9
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 2.6e-60 236.5 247 48.2
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 9.9e-60 234.6 280 47.1
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 4.9e-59 232.3 290 43.8
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.4e-59 231.9 300 43.7
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.1e-58 231.1 288 43.4
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 9.3e-58 228.0 292 44.9
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 2.1e-57 226.9 296 40.9
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 2.7e-57 226.5 292 43.5
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.7e-57 226.5 301 42.9
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 2.7e-57 226.5 289 43.9
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 4.6e-57 225.7 290 44.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.3e-56 223.4 295 44.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 6.7e-56 221.9 293 44.4
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 6.7e-56 221.9 293 44.4
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 1.9e-55 220.3 293 43.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.9e-55 220.3 208 54.3
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 2.5e-55 219.9 293 43.7
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 5.6e-55 218.8 299 43.5
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 5.6e-55 218.8 298 41.9
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 7.4e-55 218.4 293 44.7
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 7.4e-55 218.4 292 46.2
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 7.4e-55 218.4 301 41.9
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.1e-54 216.9 310 40.3
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 4.8e-54 215.7 298 42.3
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.0e-53 212.6 294 42.9
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.2e-52 211.1 291 41.9
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 3.4e-52 209.5 260 44.2
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 4.5e-52 209.1 316 39.6
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 4.9e-51 205.7 292 41.4
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 2.7e-49 199.9 267 42.3
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 4.8e-46 189.1 296 37.5
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.1e-45 188.0 293 36.9
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.4e-45 186.8 293 38.2
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 4.2e-42 176.0 209 45.9
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 2.1e-41 173.7 296 35.5
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 7.9e-41 171.8 199 44.7
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 7.9e-41 171.8 174 51.1
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 1.8e-40 170.6 177 50.8
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 3.9e-40 169.5 177 49.7
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 9.7e-39 164.9 285 33.7
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 3.7e-38 162.9 288 38.9
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.1e-34 151.4 168 48.2
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 2.5e-34 150.2 269 36.8
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 4.2e-34 149.4 195 41.5
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 5.1e-32 142.5 294 29.3
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.4e-29 134.4 268 31.0
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 1.5e-26 124.4 182 40.7
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.4e-24 117.9 237 32.1
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 7.4e-23 112.1 103 55.3
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 4.7e-17 92.8 143 39.9
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.4e-15 86.7 186 32.3
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 3.4e-15 86.7 244 25.4
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.4e-13 81.3 55 69.1
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.4e-13 80.5 151 35.1
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 1.9e-10 70.9 124 35.5
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 7.2e-10 68.9 292 21.2
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 1.2e-07 61.6 165 27.9
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.5e-07 61.2 99 36.4
AL2G22600 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 2.0e-07 60.8 99 36.4
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.3e-06 58.2 66 40.9
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 1.7e-06 57.8 116 37.1


User provided reference genes

Program Settings