Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 7.7e-64 246.9 117 100.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 3.2e-54 214.9 115 86.1
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 5.9e-48 194.1 114 76.3
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 5.9e-48 194.1 114 77.2
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.3e-47 193.0 114 76.3
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 8.5e-47 190.3 100 89.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 8.5e-47 190.3 115 76.5
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.1e-46 189.9 100 88.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.2e-46 188.3 100 87.0
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 5.5e-46 187.6 112 75.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 5.5e-46 187.6 111 75.7
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 9.4e-46 186.8 117 74.4
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 2.7e-45 185.3 112 75.9
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 4.7e-45 184.5 112 77.7
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.0e-44 181.8 112 75.9
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.0e-44 181.8 112 75.9
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 3.0e-44 181.8 115 73.0
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 4.0e-44 181.4 115 73.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 4.0e-44 181.4 106 77.4
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 5.2e-44 181.0 115 72.2
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 5.2e-44 181.0 115 72.2
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 6.8e-44 180.6 112 75.0
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 8.8e-44 180.3 115 70.4
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 1.2e-43 179.9 113 69.9
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.0e-43 179.1 115 69.6
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.6e-43 178.7 111 73.9
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 3.4e-43 178.3 116 71.6
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 3.4e-43 178.3 114 70.2
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 4.4e-43 177.9 115 72.2
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 5.7e-43 177.6 115 70.4
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 9.8e-43 176.8 113 71.7
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.3e-42 176.4 112 70.5
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.7e-42 176.0 115 67.8
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.8e-42 175.3 111 73.0
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 3.7e-42 174.9 115 68.7
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 4.8e-42 174.5 115 68.7
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 6.3e-42 174.1 115 68.7
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.4e-41 172.9 113 70.8
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.4e-41 172.9 115 68.7
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.8e-41 172.6 112 68.8
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 2.4e-41 172.2 115 68.7
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 2.4e-41 172.2 100 78.0
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 4.1e-41 171.4 112 68.8
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 5.4e-41 171.0 123 64.2
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 7.0e-41 170.6 113 69.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 9.1e-41 170.2 112 70.5
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.2e-40 169.9 107 74.8
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.6e-40 169.5 115 66.1
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 2.0e-40 169.1 109 70.6
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 2.0e-40 169.1 109 70.6
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 2.0e-40 169.1 109 70.6
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.0e-40 169.1 114 66.7
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-40 169.1 135 61.5
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.7e-40 168.7 113 67.3
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.7e-40 168.7 115 66.1
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.7e-40 168.7 115 66.1
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.5e-40 167.9 115 65.2
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.7e-39 166.0 112 66.1
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 2.9e-39 165.2 100 75.0
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 2.9e-39 165.2 114 67.5
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.0e-39 164.5 106 72.6
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 8.6e-39 163.7 113 67.3
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.1e-38 163.3 100 73.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.9e-38 162.5 100 75.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.9e-38 162.5 100 75.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 3.3e-38 161.8 123 63.4
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 4.2e-38 161.4 100 74.0
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 4.2e-38 161.4 96 74.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 7.2e-38 160.6 100 75.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 9.5e-38 160.2 112 66.1
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.2e-37 159.8 100 74.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.6e-37 159.5 112 62.5
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.6e-37 159.5 100 73.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.1e-37 159.1 99 73.7
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 2.1e-37 159.1 118 67.8
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.8e-37 158.7 100 73.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 3.6e-37 158.3 100 74.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 3.6e-37 158.3 100 75.0
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 4.7e-37 157.9 102 70.6
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.0e-36 156.8 100 71.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 1.4e-36 156.4 106 67.9
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.8e-36 156.0 106 67.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.3e-36 155.6 112 65.2
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 2.3e-36 155.6 102 70.6
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 3.0e-36 155.2 100 72.0
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 4.0e-36 154.8 100 71.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 5.2e-36 154.5 100 70.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 6.8e-36 154.1 109 65.1
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 8.9e-36 153.7 100 70.0
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.2e-35 153.3 100 70.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.0e-35 152.5 99 67.7
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-35 152.5 89 74.2
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 3.4e-35 151.8 95 70.5
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 4.4e-35 151.4 116 60.3
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 5.7e-35 151.0 101 66.3
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 2.2e-34 149.1 100 69.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 3.7e-34 148.3 98 69.4
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.7e-34 148.3 128 57.8
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.3e-34 147.5 93 72.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 6.3e-34 147.5 107 64.5
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 8.3e-34 147.1 98 67.3
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.4e-33 145.6 98 70.4
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 5.4e-33 144.4 100 68.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 5.4e-33 144.4 89 73.0
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.0e-33 144.1 89 70.8
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 2.7e-32 142.1 100 64.0
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.3e-31 139.0 87 70.1
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 2.9e-31 138.7 87 67.8
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.6e-31 137.5 106 63.2
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.5e-30 136.3 109 62.4
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 3.3e-30 135.2 85 74.1
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.0e-28 128.6 96 61.5
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 2.0e-27 125.9 100 59.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 7.5e-27 124.0 88 61.4
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 9.8e-27 123.6 81 67.9
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 4.6e-24 114.8 75 66.7
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.0e-23 113.6 75 68.0
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.3e-23 113.2 106 51.9
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 3.9e-23 111.7 99 53.5
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 8.6e-23 110.5 86 58.1
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.1e-20 103.6 101 47.5
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 9.8e-19 97.1 63 66.7
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 3.7e-18 95.1 63 63.5
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 3.7e-18 95.1 64 65.6
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 2.7e-16 89.0 71 54.9
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 3.9e-15 85.1 66 57.6
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.2e-13 77.8 60 56.7
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 9.2e-09 63.9 65 50.8
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.5e-08 62.0 66 43.9
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 3.5e-08 62.0 42 69.0
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 2.5e-06 55.8 85 36.5


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