Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G025100 Theobroma cacao HOM05D001903 ORTHO05D001847 8.1e-61 237.3 155 100.0
Gohir.A07G028000 Gossypium hirsutum HOM05D001903 ORTHO05D001847 6.7e-15 84.7 163 38.0
COL.COLO4_18856 Corchorus olitorius HOM05D001903 ORTHO05D001847 1.9e-14 83.2 41 92.7
Gohir.D07G032100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 4.3e-14 82.0 69 66.7
Gorai.001G033500 Gossypium raimondii HOM05D001903 ORTHO05D001847 4.3e-14 82.0 69 66.7
Duzib187G0727 Durio zibethinus HOM05D001903 ORTHO05D001847 7.4e-14 81.3 64 70.3
Duzib150G1231 Durio zibethinus HOM05D001903 ORTHO05D001847 3.1e-12 75.9 42 83.3
Duzib168G1198 Durio zibethinus HOM05D001903 ORTHO05D001847 1.5e-11 73.6 148 37.8
C01p06630 Brassica napus HOM05D001903 ORTHO05D001847 1.7e-10 70.1 43 76.7
Gohir.D06G100100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 6.5e-10 68.2 113 43.4
Gorai.010G115000 Gossypium raimondii HOM05D001903 ORTHO05D001847 6.5e-10 68.2 113 43.4
A01p06030 Brassica napus HOM05D001903 ORTHO05D001847 1.1e-09 67.4 43 74.4
BraA01t00568Z Brassica rapa HOM05D001903 ORTHO05D001847 1.1e-09 67.4 43 74.4
BcaC09g52017 Brassica carinata HOM05D001903 ORTHO05D001847 3.2e-09 65.9 43 72.1
BolC1t00658H Brassica oleracea HOM05D001903 ORTHO05D001847 3.2e-09 65.9 43 72.1
Thhalv10026052m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 4.2e-09 65.5 43 72.1
Actinidia14059 Actinidia chinensis HOM05D001903 ORTHO05D001847 7.2e-09 64.7 45 66.7
Hma1.2p1_0018F.1_g012310 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 7.2e-09 64.7 42 66.7
Aa31LG2G18260 Aethionema arabicum HOM05D001903 ORTHO05D001847 1.2e-08 63.9 43 72.1
Potri.006G254300 Populus trichocarpa HOM05D001903 ORTHO05D001847 1.2e-08 63.9 43 69.8
Sp7g30100 Schrenkiella parvula HOM05D001903 ORTHO05D001847 1.2e-08 63.9 43 69.8
Sabra06G0198700 Salix brachista HOM05D001903 ORTHO05D001847 1.6e-08 63.5 86 46.5
AUR62011143 Chenopodium quinoa HOM05D001903 ORTHO05D001847 2.1e-08 63.2 52 55.8
BcaB05g25297 Brassica carinata HOM05D001903 ORTHO05D001847 4.6e-08 62.0 42 69.0
Gohir.A06G098216 Gossypium hirsutum HOM05D001903 ORTHO05D001847 7.9e-08 61.2 113 40.7
Rhsim03G0248500 Rhododendron simsii HOM05D001903 ORTHO05D001847 1.4e-07 60.5 41 65.9
PGR044G1481 Punica granatum HOM05D001903 ORTHO05D001847 1.8e-07 60.1 46 65.2
PGR044G1754 Punica granatum HOM05D001903 ORTHO05D001847 3.9e-07 58.9 46 63.0
EL10Ac2g04227 Beta vulgaris HOM05D001903 ORTHO05D001847 5.1e-07 58.5 42 61.9
Eucgr.C02775 Eucalyptus grandis HOM05D001903 ORTHO05D001847 6.7e-07 58.2 82 41.5
Aa31LG4G420 Aethionema arabicum HOM05D001903 ORTHO05D001847 8.8e-07 57.8 42 64.3
AL2G41400 Arabidopsis lyrata HOM05D001903 ORTHO05D001847 8.8e-07 57.8 42 64.3
AT1G80130 Arabidopsis thaliana HOM05D001903 ORTHO05D001847 8.8e-07 57.8 42 64.3
BcaC03g16002 Brassica carinata HOM05D001903 ORTHO05D001847 8.8e-07 57.8 37 73.0
BolC2t09769H Brassica oleracea HOM05D001903 ORTHO05D001847 8.8e-07 57.8 37 73.0
AUR62016344 Chenopodium quinoa HOM05D001903 ORTHO05D001847 8.8e-07 57.8 40 65.0
C02p37590 Brassica napus HOM05D001903 ORTHO05D001847 1.1e-06 57.4 37 70.3
Nitab4.5_0000209g0150 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.1e-06 57.4 42 52.4
CAN.G1503.5 Capsicum annuum HOM05D001903 ORTHO05D001847 1.5e-06 57.0 42 54.8
A07p45380 Brassica napus HOM05D001903 ORTHO05D001847 3.3e-06 55.8 37 67.6
Sp5g35670 Schrenkiella parvula HOM05D001903 ORTHO05D001847 5.7e-06 55.1 33 75.8


User provided reference genes

Program Settings