Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G007200 Theobroma cacao HOM05D019025 ORTHO05D009846 3.1e-152 542.3 407 100.0
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 1.0e-94 351.3 418 58.9
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 8.5e-86 321.6 411 56.4
Gohir.A05G064300 Gossypium hirsutum HOM05D019025 ORTHO05D009846 1.6e-44 184.5 519 38.9
Gohir.D05G066900 Gossypium hirsutum HOM05D019025 ORTHO05D009846 5.2e-43 179.5 518 41.5
Gorai.009G067700 Gossypium raimondii HOM05D019025 ORTHO05D009846 2.7e-39 167.2 503 40.6
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 4.3e-37 159.8 434 47.5
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 1.9e-21 107.8 446 30.5
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 2.5e-21 107.5 446 30.5
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 7.4e-21 105.9 420 30.2
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 3.7e-20 103.6 451 33.9
QL12p025151 Quercus lobata HOM05D013263 ORTHO05D009846 2.5e-16 90.9 451 33.0
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 1.8e-14 84.7 389 32.6
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 1.1e-13 82.0 455 36.3
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 1.6e-12 78.2 424 29.0
TWI32G0873 Tripterygium wilfordii HOM05D013263 ORTHO05D009846 1.8e-11 74.7 426 30.0
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 2.0e-10 71.2 44 86.4
Cfa013269 Carpinus fangiana HOM05D014278 ORTHO05D009846 1.7e-09 68.2 462 29.9
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 2.2e-09 67.8 75 53.3
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 2.2e-09 67.8 438 29.9
TWI34G1417 Tripterygium wilfordii HOM05D014278 ORTHO05D009846 3.8e-09 67.0 410 30.5
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 1.4e-08 65.1 67 55.2
Medtr3g108830 Medicago truncatula HOM05D013197 ORTHO05D009846 5.5e-08 63.2 43 74.4
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 2.1e-07 61.2 433 26.3
Gohir.A07G001900 Gossypium hirsutum HOM05D037391 ORTHO05D009846 2.1e-07 61.2 271 36.9
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 2.7e-07 60.8 410 25.4
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 3.5e-07 60.5 85 43.5
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 3.5e-07 60.5 60 56.7
PSO013G0053 Papaver somniferum HOM05D003021 ORTHO05D002235 3.5e-07 60.5 72 50.0
PSO063G0327 Papaver somniferum HOM05D003021 ORTHO05D002235 3.5e-07 60.5 72 50.0
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 6.1e-07 59.7 438 26.0
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 6.1e-07 59.7 46 63.0
Lsat_1_v5_gn_4_170321 Lactuca sativa HOM05D003021 ORTHO05D002235 7.9e-07 59.3 55 60.0
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 1.0e-06 58.9 46 65.2
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 1.0e-06 58.9 77 54.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.3e-06 58.5 45 64.4
SGA_v2.0_scaffold52G19187 Striga asiatica HOM05D003021 ORTHO05D002235 1.3e-06 58.5 89 43.8
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 1.8e-06 58.2 45 64.4
Gohir.D07G002300 Gossypium hirsutum HOM05D037391 ORTHO05D047389 1.8e-06 58.2 258 37.6
Lsat_1_v5_gn_3_25381 Lactuca sativa HOM05D033113 ORTHO05D009846 1.8e-06 58.2 68 55.9
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 1.8e-06 58.2 65 50.8
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.3e-06 57.8 68 48.5
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.3e-06 57.8 68 48.5
Lj9P468T32 Lonicera japonica HOM05D003021 ORTHO05D002235 2.3e-06 57.8 45 64.4
Lalb_Chr11g0064151 Lupinus albus HOM05D013197 ORTHO05D012811 3.0e-06 57.4 44 68.2
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 3.0e-06 57.4 434 27.6
HPP92_010321 Vanilla planifolia HOM05D027320 ORTHO05D016335 3.0e-06 57.4 48 64.6
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 3.9e-06 57.0 44 63.6
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 3.9e-06 57.0 60 58.3
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 3.9e-06 57.0 45 64.4
arahy.Tifrunner.gnm1.ann1.5VU8UR Arachis hypogaea HOM05D041085 ORTHO05D012811 5.1e-06 56.6 51 58.8
arahy.Tifrunner.gnm1.ann1.8MY5LV Arachis hypogaea HOM05D041085 ORTHO05D012811 5.1e-06 56.6 51 58.8
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
DCAR_011056 Daucus carota HOM05D003021 ORTHO05D002235 5.1e-06 56.6 85 41.2
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 5.1e-06 56.6 55 56.4
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 5.1e-06 56.6 44 63.6
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 5.1e-06 56.6 92 44.6
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 5.1e-06 56.6 45 62.2
MSTRG.1612 Avicennia marina HOM05D036756 ORTHO05D009846 6.7e-06 56.2 106 44.3
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.7e-06 56.2 45 60.0
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 6.7e-06 56.2 45 62.2
Lj8P473T2 Lonicera japonica HOM05D031498 ORTHO05D016335 6.7e-06 56.2 77 53.2
MD15G1107800 Malus domestica HOM05D013263 ORTHO05D009846 6.7e-06 56.2 450 30.2
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 6.7e-06 56.2 88 44.3
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 6.7e-06 56.2 66 50.0
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 6.7e-06 56.2 86 46.5
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 8.7e-06 55.8 44 63.6
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 8.7e-06 55.8 71 53.5
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 8.7e-06 55.8 45 62.2
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 8.7e-06 55.8 68 47.1
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 8.7e-06 55.8 68 47.1
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 8.7e-06 55.8 58 58.6
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 8.7e-06 55.8 80 47.5
Phvul.001G059400 Phaseolus vulgaris HOM05D016469 ORTHO05D012811 8.7e-06 55.8 91 44.0


User provided reference genes

Program Settings