Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 5.7e-46 187.2 93 100.0
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 1.0e-18 96.7 64 73.4
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 6.6e-18 94.0 61 78.7
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 1.1e-15 86.7 67 59.7
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 8.9e-15 83.6 69 63.8
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 8.9e-15 83.6 69 60.9
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 3.4e-14 81.6 69 56.5
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 2.2e-13 79.0 82 47.6
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 3.8e-13 78.2 68 58.8
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 2.4e-12 75.5 69 53.6
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 5.4e-12 74.3 69 55.1
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.2e-11 73.2 69 53.6
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 1.2e-11 73.2 91 42.9
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 1.6e-11 72.8 69 49.3
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 1.6e-11 72.8 67 56.7
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 2.7e-11 72.0 65 60.0
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 3.5e-11 71.6 100 40.0
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 7.8e-11 70.5 61 55.7
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 1.3e-10 69.7 66 53.0
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 1.1e-09 66.6 61 54.1
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 1.1e-09 66.6 61 54.1
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 1.5e-09 66.2 69 46.4
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 1.5e-09 66.2 61 54.1
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 1.9e-09 65.9 62 48.4
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 2.5e-09 65.5 62 48.4
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 2.5e-09 65.5 62 48.4
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 4.3e-09 64.7 61 52.5
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 5.6e-09 64.3 65 44.6
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 7.3e-09 63.9 63 46.0
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 7.3e-09 63.9 63 46.0
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 9.6e-09 63.5 58 50.0
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 1.3e-08 63.2 69 46.4
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 1.6e-08 62.8 65 44.6
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 2.8e-08 62.0 65 43.1
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 2.8e-08 62.0 101 36.6
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 8.1e-08 60.5 99 38.4
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 1.1e-07 60.1 80 41.2
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 1.8e-07 59.3 63 42.9
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 2.4e-07 58.9 97 32.0
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 3.1e-07 58.5 66 40.9
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 3.1e-07 58.5 66 40.9
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 3.1e-07 58.5 66 43.9
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 5.3e-07 57.8 66 42.4
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 6.9e-07 57.4 66 40.9
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.9e-07 57.4 91 38.5
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 9.0e-07 57.0 65 40.0
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 1.2e-06 56.6 92 39.1
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 1.5e-06 56.2 107 34.6
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 2.6e-06 55.5 66 40.9
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 2.6e-06 55.5 66 47.0
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 3.4e-06 55.1 62 38.7
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 5.8e-06 54.3 63 42.9
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 7.6e-06 53.9 63 44.4


User provided reference genes

Program Settings