Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.2e-49 199.5 100 100.0
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 8.1e-46 186.8 100 94.0
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 3.1e-45 184.9 100 91.0
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 3.1e-45 184.9 100 91.0
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 3.1e-45 184.9 100 91.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.0e-44 182.2 100 92.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 3.7e-43 177.9 100 91.0
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 5.6e-39 164.1 100 83.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.6e-38 162.5 103 83.5
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.4e-37 158.7 102 80.4
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 5.8e-36 154.1 100 82.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.8e-36 154.1 101 80.2
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.3e-35 152.9 102 78.4
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.7e-35 152.5 101 79.2
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.9e-35 151.8 102 77.5
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.9e-35 151.8 102 78.4
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.4e-34 149.4 101 79.2
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-34 149.4 98 80.6
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.4e-34 149.4 100 76.0
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 9.2e-34 146.7 101 75.2
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 9.2e-34 146.7 102 78.4
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 77.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 78.4
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.7e-33 145.2 103 75.7
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 7.8e-33 143.7 102 77.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 7.8e-33 143.7 102 77.5
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.0e-32 143.3 103 74.8
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.7e-32 142.5 100 75.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.7e-32 142.5 102 74.5
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 3.9e-32 141.4 100 70.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 3.9e-32 141.4 102 73.5
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.9e-32 141.4 103 73.8
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 5.1e-32 141.0 98 75.5
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 6.6e-32 140.6 101 69.3
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 6.6e-32 140.6 104 77.9
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 8.7e-32 140.2 101 74.3
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 8.7e-32 140.2 101 74.3
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.1e-31 139.8 98 74.5
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.5e-31 139.4 100 74.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.5e-31 139.4 100 74.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.9e-31 139.0 97 77.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 1.9e-31 139.0 98 74.5
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 2.5e-31 138.7 101 74.3
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.3e-31 138.3 99 73.7
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 5.6e-31 137.5 100 71.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.3e-30 136.3 100 74.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.3e-30 136.3 103 72.8
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.6e-30 136.0 103 71.8
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.6e-30 136.0 103 71.8
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 2.1e-30 135.6 100 71.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 2.1e-30 135.6 101 70.3
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.1e-30 135.6 102 73.5
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 3.6e-30 134.8 104 71.2
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 3.6e-30 134.8 104 71.2
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 3.6e-30 134.8 101 75.2
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.1e-29 133.3 104 70.2
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.1e-29 133.3 104 70.2
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.4e-29 132.1 105 68.6
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 2.4e-29 132.1 93 77.4
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 5.3e-29 131.0 102 72.5
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-28 129.4 94 70.2
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.6e-28 128.6 97 71.1
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 3.4e-28 128.3 102 72.5
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 5.8e-28 127.5 102 70.6
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 5.8e-28 127.5 101 67.3
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 9.9e-28 126.7 103 69.9
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.7e-27 125.9 105 68.6
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 2.2e-27 125.6 102 68.6
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 4.9e-27 124.4 106 65.1
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 6.4e-27 124.0 104 65.4
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 8.4e-27 123.6 94 68.1
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.1e-26 123.2 93 74.2
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.4e-26 122.9 107 65.4
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.9e-26 122.5 98 62.2
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 2.4e-26 122.1 104 64.4
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 3.2e-26 121.7 103 68.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 4.2e-26 121.3 93 73.1
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 5.4e-26 120.9 103 69.9
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 5.4e-26 120.9 103 67.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 7.1e-26 120.6 96 69.8
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 7.1e-26 120.6 103 66.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 7.1e-26 120.6 103 66.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 9.3e-26 120.2 100 69.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.2e-25 119.8 98 65.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.6e-25 119.4 96 70.8
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 2.7e-25 118.6 94 66.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.7e-25 118.6 103 66.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 6.0e-25 117.5 103 66.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 7.8e-25 117.1 100 61.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 6.9e-21 104.0 111 56.8
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.7e-19 99.4 83 61.4
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.9e-18 95.9 86 62.8
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-17 92.4 90 61.1
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.7e-17 92.0 100 56.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 6.0e-17 90.9 80 63.8
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-15 86.7 75 64.0
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 3.3e-15 85.1 105 54.3
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 3.7e-14 81.6 93 53.8
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 3.7e-14 81.6 64 70.3
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 3.7e-06 55.1 63 52.4


User provided reference genes

Program Settings