Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 1.5e-65 252.7 129 100.0
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 1.6e-33 146.4 95 78.9
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 7.7e-33 144.1 95 77.9
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 7.7e-33 144.1 125 64.0
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.3e-32 143.3 92 79.3
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.7e-32 142.9 99 74.7
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.7e-32 142.9 99 74.7
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 8.6e-32 140.6 99 73.7
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 8.6e-32 140.6 99 73.7
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 8.6e-32 140.6 93 79.6
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 8.6e-32 140.6 93 79.6
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 1.1e-31 140.2 114 66.7
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.1e-31 140.2 114 66.7
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.5e-31 139.8 86 81.4
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.9e-31 139.4 99 72.7
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 1.9e-31 139.4 99 72.7
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 3.2e-31 138.7 99 72.7
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 3.2e-31 138.7 99 72.7
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 3.2e-31 138.7 99 72.7
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.2e-31 138.7 99 72.7
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 7.2e-31 137.5 86 80.2
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 7.2e-31 137.5 86 79.1
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 1.2e-30 136.7 99 71.7
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 2.8e-30 135.6 86 79.1
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 4.7e-30 134.8 86 79.1
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 4.7e-30 134.8 86 79.1
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 6.1e-30 134.4 86 77.9
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.0e-30 134.0 99 69.7
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 1.0e-29 133.7 85 78.8
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 1.4e-29 133.3 84 79.8
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.4e-29 133.3 84 79.8
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 1.8e-29 132.9 86 77.9
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.3e-29 132.5 92 71.7
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 2.3e-29 132.5 86 77.9
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.3e-29 132.5 87 77.0
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.0e-29 132.1 85 77.6
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.0e-29 132.1 85 77.6
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 5.2e-29 131.3 86 76.7
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.2e-29 131.3 99 69.7
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 6.8e-29 131.0 84 78.6
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 6.8e-29 131.0 84 78.6
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 6.8e-29 131.0 84 78.6
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 6.8e-29 131.0 84 78.6
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 8.8e-29 130.6 86 76.7
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-28 130.2 85 77.6
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.5e-28 129.8 86 76.7
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 2.0e-28 129.4 82 79.3
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.0e-28 129.4 84 77.4
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.4e-28 128.3 99 67.7
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.7e-28 127.9 95 69.5
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 2.2e-27 125.9 93 71.0
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.8e-27 125.6 86 73.3
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 4.9e-27 124.8 82 75.6
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 2.4e-26 122.5 77 79.2
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 5.4e-26 121.3 77 79.2
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.0e-26 120.9 84 72.6
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.2e-25 120.2 75 80.0
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.2e-25 120.2 75 80.0
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.2e-25 120.2 75 80.0
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.2e-25 120.2 75 80.0
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 5.9e-25 117.9 77 76.6
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.9e-25 117.9 104 63.5
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 7.8e-25 117.5 86 72.1
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.0e-24 117.1 79 73.4
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 2.3e-24 115.9 83 71.1
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 5.0e-24 114.8 77 75.3
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 5.0e-24 114.8 77 75.3
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 5.0e-24 114.8 77 75.3
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 6.6e-24 114.4 75 77.3
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 8.6e-24 114.0 80 70.0
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 3.6e-22 108.6 75 69.3
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.4e-21 106.7 75 69.3
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 1.8e-21 106.3 69 76.8
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 3.0e-21 105.5 67 77.6
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.6e-20 102.4 77 68.8
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 4.4e-20 101.7 64 78.1
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 7.5e-20 100.9 67 73.1
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.7e-19 99.8 87 62.1
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.4e-19 97.8 99 57.6
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-18 96.7 91 58.2
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.4e-18 95.9 63 73.0
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.1e-18 95.1 67 70.1
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 4.1e-18 95.1 77 64.9
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 4.1e-18 95.1 66 72.7
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.2e-18 94.0 74 64.9
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-17 93.6 111 48.6
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 2.7e-17 92.4 90 58.9
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 2.7e-17 92.4 75 61.3
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 3.5e-17 92.0 64 70.3
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 7.8e-17 90.9 75 61.3
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 3.9e-16 88.6 74 67.6
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 6.6e-16 87.8 75 56.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 8.6e-16 87.4 75 53.3
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 1.1e-15 87.0 58 74.1
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.3e-15 85.1 64 67.2
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 9.5e-15 84.0 52 78.8
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 1.2e-14 83.6 66 62.1
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.2e-14 83.6 75 52.0
SHI11894 Sapria himalayana HOM05D000533 ORTHO05D001069 2.8e-14 82.4 54 74.1
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 4.7e-14 81.6 92 48.9
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 1.1e-13 80.5 72 56.9
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 1.4e-13 80.1 53 73.6
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.4e-13 80.1 83 51.8
SHI25676 Sapria himalayana HOM05D000533 ORTHO05D001069 4.0e-13 78.6 48 70.8
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 6.8e-13 77.8 65 60.0
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 6.4e-11 71.2 51 68.6
Nitab4.5_0001649g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.0e-09 64.7 43 69.8
ClCG08G009690 Citrullus lanatus HOM05D000533 ORTHO05D001069 7.8e-09 64.3 43 72.1
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 7.8e-09 64.3 44 72.7
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 8.6e-08 60.8 68 54.4
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.1e-07 60.5 47 68.1
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.7e-06 55.1 38 71.1


User provided reference genes

Program Settings