Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 5.1e-145 517.7 257 100.0
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.8e-126 456.1 257 87.2
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.0e-124 450.3 255 87.1
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.9e-124 448.7 255 87.1
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 3.8e-124 448.4 255 86.7
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 4.2e-115 418.3 253 83.8
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 8.3e-111 404.1 246 78.9
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.4e-110 401.4 246 78.9
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 7.2e-107 391.0 245 78.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 2.7e-106 389.0 252 76.2
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 3.6e-106 388.7 240 80.0
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 4.0e-105 385.2 240 78.3
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 8.8e-105 384.0 222 81.5
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.5e-104 383.3 225 79.1
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.6e-104 382.5 229 77.7
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 4.4e-104 381.7 229 78.6
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.8e-103 379.0 245 75.1
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 4.9e-103 378.3 224 79.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 6.3e-103 377.9 251 76.5
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.1e-102 377.1 239 75.7
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 1.8e-102 376.3 253 74.7
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.4e-102 375.9 252 75.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 4.1e-102 375.2 255 74.1
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 4.1e-102 375.2 243 74.1
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 5.4e-102 374.8 247 75.3
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.2e-101 373.6 251 72.9
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 2.0e-101 372.9 251 75.3
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 2.0e-101 372.9 223 81.2
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 4.5e-101 371.7 251 73.3
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 4.5e-101 371.7 213 81.7
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.9e-101 371.3 257 72.8
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 7.7e-101 370.9 251 73.7
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.0e-100 370.5 246 74.8
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 2.3e-100 369.4 237 75.5
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.9e-100 369.0 248 73.8
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.9e-99 366.3 214 80.4
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 3.3e-99 365.5 240 73.3
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 7.3e-99 364.4 250 73.2
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 9.5e-99 364.0 246 73.6
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.6e-98 363.2 197 83.8
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.6e-98 363.2 280 67.5
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.6e-98 362.1 194 87.1
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 4.7e-98 361.7 252 73.8
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 1.0e-97 360.5 242 73.6
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 1.0e-97 360.5 242 72.3
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.4e-97 360.1 244 74.2
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.3e-97 359.4 255 67.8
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.3e-97 359.4 255 71.0
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.3e-97 359.4 250 70.0
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.3e-97 359.4 245 73.9
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 3.0e-97 359.0 233 74.2
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 3.0e-97 359.0 212 80.7
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 6.8e-97 357.8 250 70.0
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 1.2e-96 357.1 242 71.9
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.5e-96 356.7 250 71.2
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 4.4e-96 355.1 255 69.8
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.7e-96 354.8 254 69.3
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 9.8e-96 354.0 245 69.8
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.7e-95 353.2 220 76.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.7e-95 353.2 234 73.1
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.9e-95 352.4 214 78.5
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 6.4e-95 351.3 250 69.6
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 8.3e-95 350.9 215 76.3
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.8e-94 349.7 197 82.2
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 3.2e-94 349.0 227 73.6
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 7.0e-94 347.8 250 68.0
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 9.2e-94 347.4 194 82.5
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.7e-93 345.9 228 75.0
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.0e-92 344.0 241 70.5
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.3e-92 343.6 245 69.8
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.1e-91 340.5 252 68.7
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.5e-91 340.1 195 81.0
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 2.1e-90 336.3 194 79.4
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.6e-90 335.5 256 67.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.4e-89 333.6 256 65.6
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 5.2e-89 331.6 186 83.9
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.9e-87 325.1 243 65.4
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.9e-86 323.2 236 69.1
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 9.2e-86 320.9 182 81.9
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 5.6e-83 311.6 207 76.8
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.3e-83 311.2 211 71.1
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.6e-82 310.1 211 72.0
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.3e-81 306.2 239 66.9
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 6.8e-81 304.7 195 74.9
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.3e-79 300.4 195 75.4
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.7e-79 300.1 185 73.0
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.7e-77 292.7 220 67.7
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 6.0e-77 291.6 245 59.2
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 4.3e-75 285.4 191 67.0
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.8e-74 282.7 178 70.2
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 5.2e-73 278.5 212 63.7
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 6.4e-71 271.6 244 61.5
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 3.5e-69 265.8 176 69.9
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.7e-68 263.5 258 58.5
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.8e-65 253.4 138 82.6
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.9e-63 246.1 147 77.6
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.4e-57 226.5 210 58.6
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 6.9e-57 224.9 210 58.1
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.2e-56 224.2 172 61.6
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 3.8e-55 219.2 137 76.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 5.1e-52 208.8 197 51.8
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 2.8e-50 203.0 198 54.5
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 5.3e-49 198.7 200 55.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 2.4e-46 189.9 161 60.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.5e-43 180.6 103 76.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.3e-42 177.6 149 54.4
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.8e-40 168.7 105 73.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 1.8e-28 130.6 71 87.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.2e-26 123.6 70 75.7
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.2e-24 117.9 226 39.8
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 4.7e-13 79.3 62 67.7


User provided reference genes

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