Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 3.5e-58 228.0 112 100.0
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.3e-49 199.5 112 86.6
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 3.9e-49 198.0 112 84.8
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 8.7e-49 196.8 112 84.8
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 5.7e-48 194.1 112 83.9
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.8e-47 191.8 107 82.2
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.8e-47 191.8 107 82.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 3.7e-47 191.4 117 82.9
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 2.0e-45 185.7 107 80.4
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.0e-45 185.7 111 77.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 2.6e-45 185.3 100 85.0
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 2.9e-44 181.8 106 78.3
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.2e-43 177.9 110 70.9
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 7.2e-43 177.2 107 74.8
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 9.3e-43 176.8 114 74.6
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 2.7e-42 175.3 110 70.0
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.7e-42 175.3 107 76.6
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.0e-41 173.3 105 73.3
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.3e-41 172.9 112 71.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.3e-41 172.9 113 71.7
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.8e-41 172.6 107 72.9
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.3e-41 172.2 123 65.9
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 2.3e-41 172.2 101 77.2
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 3.0e-41 171.8 103 75.7
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 3.0e-41 171.8 111 69.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.9e-41 171.4 105 72.4
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.1e-41 171.0 101 76.2
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 5.1e-41 171.0 112 72.3
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 6.7e-41 170.6 112 71.4
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 8.7e-41 170.2 111 72.1
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.1e-40 169.9 112 70.5
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.1e-40 169.9 109 71.6
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.9e-40 169.1 111 69.4
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.9e-40 169.1 107 72.9
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 4.3e-40 167.9 110 69.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.7e-39 166.0 112 67.9
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.7e-39 164.9 111 70.3
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.7e-39 164.9 99 74.7
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.8e-39 164.5 111 69.4
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.8e-39 164.5 111 69.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 4.8e-39 164.5 103 73.8
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 6.3e-39 164.1 111 69.4
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 6.3e-39 164.1 100 75.0
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.1e-38 163.3 101 72.3
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.4e-38 162.9 104 73.1
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.8e-38 162.5 101 71.3
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 2.4e-38 162.2 107 72.0
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 2.4e-38 162.2 107 72.0
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 2.4e-38 162.2 107 72.0
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 3.1e-38 161.8 101 74.3
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 4.1e-38 161.4 114 68.4
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 4.1e-38 161.4 105 69.5
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.3e-38 161.0 101 72.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.3e-38 161.0 101 73.3
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 5.3e-38 161.0 113 68.1
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 6.9e-38 160.6 101 69.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 6.9e-38 160.6 117 67.5
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 6.9e-38 160.6 112 69.6
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 6.9e-38 160.6 115 66.1
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 9.1e-38 160.2 107 70.1
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.2e-37 159.8 111 67.6
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.2e-37 159.8 99 72.7
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.5e-37 159.5 101 71.3
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.5e-37 159.5 100 74.0
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.5e-37 159.5 112 67.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.0e-37 159.1 112 67.0
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.0e-37 159.1 112 69.6
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 2.6e-37 158.7 107 72.0
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 3.4e-37 158.3 111 66.7
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.4e-37 158.3 99 73.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 5.9e-37 157.5 112 67.9
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 7.7e-37 157.1 100 70.0
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 7.7e-37 157.1 112 68.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.3e-36 156.4 113 64.6
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 3.8e-36 154.8 107 70.1
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.9e-35 152.5 110 65.5
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 2.5e-35 152.1 97 73.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.5e-35 152.1 148 53.4
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 4.2e-35 151.4 104 67.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.2e-34 149.8 106 63.2
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.2e-34 149.8 101 67.3
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.1e-34 149.1 100 67.0
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.7e-34 148.7 91 71.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.7e-34 148.7 106 63.2
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 4.7e-34 147.9 101 67.3
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 6.1e-34 147.5 105 65.7
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.4e-33 146.4 103 68.0
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 3.0e-33 145.2 102 65.7
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.5e-32 142.9 102 64.7
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.5e-32 142.9 102 64.7
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.5e-32 142.9 104 64.4
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.0e-32 142.5 104 64.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 7.4e-32 140.6 102 64.7
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 7.4e-32 140.6 102 64.7
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-30 136.7 102 63.7
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.4e-30 135.6 107 59.8
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 3.1e-30 135.2 83 74.7
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 8.5e-28 127.1 107 54.2
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 8.5e-28 127.1 84 71.4
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 8.5e-28 127.1 68 85.3
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 3.2e-27 125.2 88 69.3
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 7.2e-27 124.0 81 69.1
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.4e-25 119.8 68 75.0
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 8.2e-23 110.5 79 67.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 5.3e-22 107.8 74 71.6
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 7.0e-22 107.5 75 69.3
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 4.5e-21 104.8 77 66.2
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 4.5e-21 104.8 112 44.6
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 6.5e-20 100.9 85 61.2
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 3.2e-19 98.6 95 44.2
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 4.2e-19 98.2 107 45.8
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.2e-18 96.7 114 41.2
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 2.2e-15 85.9 62 54.8
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 3.7e-15 85.1 98 43.9
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.7e-15 85.1 97 47.4
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.3e-12 76.6 54 64.8
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 8.5e-12 73.9 44 72.7
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 9.4e-11 70.5 66 42.4


User provided reference genes

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