Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 6.4e-42 173.7 91 100.0
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.0e-40 167.2 90 95.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.0e-40 167.2 90 95.6
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.0e-40 167.2 90 95.6
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.3e-39 166.0 90 94.4
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.3e-39 165.2 90 94.4
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.8e-36 155.6 95 90.5
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 3.1e-36 154.8 86 94.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 9.0e-36 153.3 86 93.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 9.0e-36 153.3 92 91.3
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.5e-35 152.5 88 92.0
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 3.4e-35 151.4 87 88.5
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 3.4e-35 151.4 91 89.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 5.8e-35 150.6 88 86.4
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 5.8e-35 150.6 84 92.9
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 7.6e-35 150.2 91 86.8
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 7.6e-35 150.2 86 90.7
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 9.9e-35 149.8 93 87.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.3e-34 149.4 84 91.7
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.3e-34 149.4 84 91.7
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.9e-34 148.3 85 88.2
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.8e-34 147.9 86 89.5
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.8e-34 147.9 86 89.5
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 3.8e-34 147.9 91 87.9
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 3.8e-34 147.9 86 88.4
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 3.8e-34 147.9 90 87.8
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.9e-34 147.5 81 88.9
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.9e-34 147.5 88 89.8
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 6.4e-34 147.1 79 94.9
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 6.4e-34 147.1 82 90.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 6.4e-34 147.1 83 92.8
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 6.4e-34 147.1 84 90.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 6.4e-34 147.1 90 86.7
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.4e-33 146.0 79 89.9
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.4e-33 146.0 86 87.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.4e-33 146.0 82 90.2
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.4e-33 146.0 85 91.8
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.9e-33 145.6 90 84.4
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.9e-33 145.6 91 82.4
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.9e-33 145.6 87 86.2
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.4e-33 145.2 83 88.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 3.2e-33 144.8 86 90.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 4.2e-33 144.4 83 89.2
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.2e-33 144.4 83 90.4
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 4.2e-33 144.4 87 85.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 4.2e-33 144.4 83 89.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 4.2e-33 144.4 85 90.6
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 5.5e-33 144.1 92 83.7
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 5.5e-33 144.1 87 82.8
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 7.1e-33 143.7 87 82.8
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 7.1e-33 143.7 85 84.7
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 9.3e-33 143.3 90 82.2
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 9.3e-33 143.3 90 82.2
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 9.3e-33 143.3 85 89.4
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 9.3e-33 143.3 85 88.2
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.2e-32 142.9 84 86.9
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.2e-32 142.9 91 82.4
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.6e-32 142.5 86 84.9
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 4.6e-32 141.0 86 83.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.6e-32 141.0 82 85.4
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.0e-32 140.6 84 86.9
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 83.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.0e-31 139.8 86 84.9
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.3e-31 139.4 79 84.8
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.3e-31 139.4 82 79.3
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.8e-31 139.0 86 84.9
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.8e-31 139.0 85 83.5
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.3e-31 138.7 90 78.9
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.9e-31 137.9 90 80.0
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.9e-31 137.9 81 86.4
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.9e-30 135.6 98 76.5
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.5e-30 135.2 95 75.8
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.5e-30 135.2 98 75.5
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 4.3e-30 134.4 84 78.6
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 7.4e-30 133.7 98 76.5
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 2.1e-29 132.1 83 81.9
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.8e-29 131.7 76 88.2
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 3.7e-29 131.3 93 77.4
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 3.7e-29 131.3 111 69.4
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.1e-28 129.8 74 87.8
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.8e-28 129.0 86 73.3
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 1.8e-28 129.0 69 95.7
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.1e-28 128.3 82 79.3
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 3.1e-28 128.3 82 79.3
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.0e-28 127.9 91 73.6
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.0e-28 127.9 91 73.6
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 6.9e-28 127.1 70 92.9
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 9.0e-28 126.7 75 81.3
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 9.0e-28 126.7 87 70.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 9.0e-28 126.7 87 70.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 9.0e-28 126.7 87 70.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 9.0e-28 126.7 85 75.3
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.0e-27 125.6 75 85.3
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 2.0e-27 125.6 79 78.5
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.6e-27 125.2 78 78.2
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.6e-27 125.2 81 77.8
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 5.8e-27 124.0 73 91.8
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 5.8e-27 124.0 74 90.5
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 7.6e-27 123.6 88 72.7
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.6e-27 123.6 101 68.3
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-26 122.9 85 71.8
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.3e-26 122.9 85 71.8
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-26 122.5 85 71.8
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-26 122.5 85 71.8
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-26 122.5 85 71.8
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-26 122.5 85 71.8
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.7e-26 122.5 70 88.6
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.2e-26 122.1 85 68.2
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 6.5e-26 120.6 73 78.1
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.1e-25 119.8 70 84.3
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.1e-25 119.8 68 86.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.5e-25 118.6 81 74.1
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 3.2e-25 118.2 80 72.5
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 7.1e-25 117.1 64 89.1
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.1e-25 117.1 68 85.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 7.9e-24 113.6 72 79.2
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.6e-21 105.9 59 84.7
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.8e-21 105.1 69 76.8
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 9.0e-20 100.1 85 67.1
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 3.4e-19 98.2 85 64.7
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 6.5e-18 94.0 84 57.1
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 7.2e-17 90.5 64 75.0
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 3.3e-14 81.6 62 61.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 9.7e-14 80.1 87 48.3
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 8.2e-13 77.0 47 83.0
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 8.2e-13 77.0 51 74.5
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.0e-10 70.1 70 51.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 2.2e-10 68.9 61 59.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4


User provided reference genes

Program Settings