Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 7.1e-139 497.3 255 100.0
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 4.0e-81 305.4 260 66.5
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 4.0e-81 305.4 225 71.6
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 6.8e-81 304.7 238 69.3
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 7.7e-77 291.2 240 66.7
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 8.9e-73 277.7 231 64.5
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 6.3e-71 271.6 246 59.8
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 3.2e-70 269.2 250 59.6
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 5.6e-67 258.5 208 65.9
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 3.4e-64 249.2 202 61.9
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 1.3e-63 247.3 163 80.4
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 2.2e-63 246.5 208 63.0
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 2.9e-63 246.1 154 77.3
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 1.7e-60 236.9 193 63.7
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 1.9e-54 216.9 173 68.2
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 2.4e-54 216.5 150 76.0
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 2.4e-54 216.5 159 73.0
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 2.2e-47 193.4 139 68.3
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.4e-46 190.7 191 51.8
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.4e-46 190.7 191 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 4.1e-46 189.1 139 67.6
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 7.1e-46 188.3 152 60.5
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 1.6e-45 187.2 139 65.5
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 1.6e-45 187.2 139 65.5
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 2.1e-45 186.8 227 47.6
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 7.3e-43 178.3 354 35.9
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 9.9e-40 167.9 199 52.3
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 3.0e-36 156.4 188 47.9
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 4.3e-35 152.5 94 83.0
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 9.6e-35 151.4 136 54.4
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 1.3e-34 151.0 96 81.2
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 1.6e-34 150.6 94 81.9
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 2.8e-34 149.8 129 55.8
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 1.1e-33 147.9 135 57.8
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 1.8e-33 147.1 93 82.8
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 1.8e-33 147.1 158 53.2
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 3.1e-33 146.4 93 78.5
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 1.2e-32 144.4 94 74.5
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 3.4e-32 142.9 93 77.4
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 4.4e-32 142.5 224 43.8
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 2.1e-29 133.7 138 49.3
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 1.9e-27 127.1 73 89.0
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 3.6e-26 122.9 74 82.4
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 6.9e-25 118.6 74 82.4
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 4.5e-24 115.9 143 49.7
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 8.4e-23 111.7 253 36.4
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 1.4e-22 110.9 141 46.8
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 1.9e-22 110.5 74 75.7
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 3.9e-20 102.8 78 69.2
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.9e-15 86.7 125 49.6
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 4.9e-15 85.9 51 76.5
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 3.2e-14 83.2 124 41.1
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 5.1e-12 75.9 95 44.2
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 8.7e-12 75.1 94 41.5
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 9.6e-11 71.6 46 67.4


User provided reference genes

Program Settings