Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G100200 Theobroma cacao HOM05D001619 ORTHO05D408418 4.7e-61 237.7 117 100.0
COL.COLO4_12314 Corchorus olitorius HOM05D001619 ORTHO05D001541 8.9e-12 73.9 50 74.0
Cpa.g.sc286.13 Carica papaya HOM05D001619 ORTHO05D001541 3.5e-08 62.0 35 77.1
MD06G1004600 Malus domestica HOM05D001619 ORTHO05D001541 4.6e-08 61.6 35 74.3
FAN08G3113 Fragaria x ananassa HOM05D001619 ORTHO05D001541 6.0e-08 61.2 35 71.4
Prupe.5G005900 Prunus persica HOM05D001619 ORTHO05D001541 6.0e-08 61.2 35 74.3
Atru.chr13.66 Acer truncatum HOM05D001619 ORTHO05D001541 7.8e-08 60.8 35 77.1
RcHm_v2.0_Chr7g0216621 Rosa chinensis HOM05D001619 ORTHO05D001541 1.3e-07 60.1 35 71.4
FvH4_5g26010 Fragaria vesca HOM05D001619 ORTHO05D001541 1.7e-07 59.7 35 68.6
FAN04G3031 Fragaria x ananassa HOM05D001619 ORTHO05D001541 1.7e-07 59.7 35 68.6
FAN13G2253 Fragaria x ananassa HOM05D001619 ORTHO05D001541 1.7e-07 59.7 35 68.6
CANSAT78G1558 Cannabis sativa HOM05D001619 ORTHO05D001541 3.0e-07 58.9 35 74.3
Aa31LG7G5030 Aethionema arabicum HOM05D001619 ORTHO05D001541 8.6e-07 57.4 32 78.1
Ciclev10001358m.g Citrus clementina HOM05D001619 ORTHO05D001541 1.5e-06 56.6 35 68.6
Sp1g18570 Schrenkiella parvula HOM05D001619 ORTHO05D001541 1.9e-06 56.2 32 81.2
MBI01_g17252_MAGBIO Magnolia biondii HOM05D001619 ORTHO05D001541 5.6e-06 54.7 35 68.6
QL02p015706 Quercus lobata HOM05D001619 ORTHO05D001541 5.6e-06 54.7 35 68.6
Carub.0001s2034 Capsella rubella HOM05D001619 ORTHO05D001541 7.3e-06 54.3 29 82.8
CiPaw.07G133900 Carya illinoinensis HOM05D001619 ORTHO05D001541 7.3e-06 54.3 35 68.6
Sabra02G0003800 Salix brachista HOM05D001619 ORTHO05D001541 7.3e-06 54.3 34 67.6
arahy.Tifrunner.gnm1.ann1.X04J1J Arachis hypogaea HOM05D001619 ORTHO05D001541 9.5e-06 53.9 35 68.6
CARHR021300 Cardamine hirsuta HOM05D001619 ORTHO05D001541 9.5e-06 53.9 32 75.0
Rhsim06G0003500 Rhododendron simsii HOM05D001619 ORTHO05D001541 9.5e-06 53.9 35 71.4
Sabra11G0071400 Salix brachista HOM05D001619 ORTHO05D001541 9.5e-06 53.9 32 71.9
TWI12G0029 Tripterygium wilfordii HOM05D001619 ORTHO05D001541 9.5e-06 53.9 32 71.9


User provided reference genes

Program Settings