Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 8.9e-262 906.4 447 100.0
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 6.0e-234 813.9 434 90.6
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 9.9e-229 796.6 449 86.2
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 6.0e-226 787.3 449 86.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 1.3e-225 786.2 449 86.0
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 7.7e-197 690.6 425 77.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.0e-196 690.3 449 77.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 2.9e-196 688.7 449 74.6
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.5e-192 676.4 424 75.5
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 3.5e-189 665.2 451 70.7
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.8e-188 661.8 422 75.6
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.5e-187 659.8 444 71.4
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.9e-187 659.4 444 71.2
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.5e-187 659.1 446 71.3
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.6e-186 656.4 438 69.9
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 3.6e-186 655.2 444 70.7
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.0e-185 653.7 433 71.8
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.3e-185 652.5 449 69.0
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 4.0e-185 651.7 435 72.2
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.0e-184 649.4 423 71.6
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 5.7e-184 647.9 428 71.7
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 7.5e-184 647.5 425 71.3
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 9.7e-184 647.1 446 70.6
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 9.7e-184 647.1 424 72.2
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.8e-183 645.6 448 69.0
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 3.7e-183 645.2 433 70.7
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 6.3e-183 644.4 427 70.7
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 5.3e-182 641.3 430 68.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.6e-181 639.8 425 70.8
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.3e-180 636.7 400 75.0
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.7e-180 636.3 431 69.6
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-179 632.1 429 69.9
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 7.2e-179 630.9 438 68.9
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.7e-178 629.0 438 67.6
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 3.6e-178 628.6 430 67.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 3.6e-178 628.6 430 67.9
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.6e-178 628.6 447 68.0
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 4.7e-178 628.2 433 67.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 8.0e-178 627.5 431 67.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.4e-177 626.7 436 67.4
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.4e-177 626.7 429 69.5
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.3e-177 625.9 425 67.8
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.0e-177 625.2 410 70.7
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.2e-176 623.6 454 66.1
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.2e-176 623.6 450 66.7
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.4e-176 622.1 425 67.3
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 3.4e-176 622.1 430 67.2
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 3.4e-176 622.1 433 69.5
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 3.4e-176 622.1 447 66.2
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 7.5e-176 620.9 448 66.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.3e-175 620.2 390 74.6
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 4.8e-175 618.2 442 67.2
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.4e-174 615.9 446 66.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 5.4e-174 614.8 451 66.3
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 7.0e-174 614.4 441 67.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 2.3e-172 609.4 445 66.7
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 8.6e-172 607.4 426 67.6
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.5e-171 605.9 450 65.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 3.3e-171 605.5 433 65.8
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.2e-170 603.6 390 71.8
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.3e-167 593.6 421 67.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.4e-166 589.3 448 63.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.4e-166 589.3 445 64.5
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.2e-165 587.0 445 64.3
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 3.5e-165 585.5 437 65.0
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.3e-164 582.8 425 64.5
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.8e-164 582.0 424 65.3
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.5e-163 580.1 423 66.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.2e-162 577.0 431 67.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.1e-161 572.4 448 61.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.8e-161 571.2 396 67.2
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.6e-160 569.3 448 62.5
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.3e-159 564.3 420 66.4
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.2e-158 562.4 438 62.6
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 8.3e-151 537.7 448 60.5
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 7.8e-149 531.2 436 61.7
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.8e-145 520.0 390 63.6
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.6e-144 516.2 331 74.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.7e-143 512.3 334 72.8
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.2e-142 509.2 356 71.3
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-141 507.3 414 62.1
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.7e-141 506.1 418 57.2
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.9e-140 502.3 409 57.9
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 6.6e-140 501.5 404 61.4
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.6e-136 489.6 399 62.2
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.2e-135 486.5 330 66.1
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 6.4e-135 485.0 355 67.0
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 8.4e-135 484.6 432 54.9
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.6e-133 480.3 336 65.8
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.5e-133 479.2 381 62.5
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.1e-131 474.2 431 54.5
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 3.3e-131 472.6 336 66.1
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.2e-109 401.0 421 47.3
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 7.9e-101 371.7 229 73.8
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 5.7e-91 339.0 238 67.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 9.1e-81 305.1 236 64.8
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.0e-79 301.6 198 70.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-67 261.2 249 56.2
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 3.4e-59 233.4 388 35.8
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.6e-53 214.5 130 77.7
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.6e-53 214.5 130 77.7
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.4e-49 201.4 170 60.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 1.5e-46 191.4 395 34.4
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.8e-36 157.9 159 50.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 4.4e-35 153.3 133 57.1
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.7e-34 151.4 170 49.4
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.7e-34 151.4 170 49.4
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.2e-32 145.2 105 69.5
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 4.0e-28 130.2 99 63.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.6e-22 109.8 76 67.1
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 6.8e-20 102.8 63 68.3
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 2.1e-16 91.3 207 29.5
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 4.3e-14 83.6 219 30.6
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 4.3e-14 83.6 220 28.6
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 8.1e-13 79.3 369 20.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.6e-11 74.3 75 45.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.6e-08 63.5 77 40.3


User provided reference genes

Program Settings