Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G094600 Theobroma cacao HOM05D012398 ORTHO05D011209 7.4e-40 166.8 86 100.0
Gohir.A05G206700 Gossypium hirsutum HOM05D012398 ORTHO05D011209 6.1e-18 94.0 90 63.3
COL.COLO4_28570 Corchorus olitorius HOM05D012398 ORTHO05D011209 4.4e-16 87.8 91 59.3
Manes.18G043100 Manihot esculenta HOM05D012398 ORTHO05D011209 7.5e-16 87.0 89 64.0
Potri.014G021250 Populus trichocarpa HOM05D012398 ORTHO05D011209 9.8e-16 86.7 87 62.1
Sabra02G0095700 Salix brachista HOM05D012398 ORTHO05D011209 1.7e-15 85.9 89 59.6
Potri.002G121800 Populus trichocarpa HOM05D012398 ORTHO05D011209 1.1e-14 83.2 87 58.6
Gorai.010G023900 Gossypium raimondii HOM05D012398 ORTHO05D011209 1.7e-12 75.9 79 59.5
TAR381G0619 Trochodendron aralioides HOM05D012738 ORTHO05D011209 1.7e-12 75.9 86 54.7
Gohir.A06G022350 Gossypium hirsutum HOM05D012398 ORTHO05D011209 1.1e-11 73.2 79 58.2
CiPaw.15G049200 Carya illinoinensis HOM05D012738 ORTHO05D011209 1.5e-11 72.8 84 46.4
Gorai.009G216600 Gossypium raimondii HOM05D012398 ORTHO05D011209 1.5e-11 72.8 73 54.8
Nn1g04661 Nelumbo nucifera HOM05D012738 ORTHO05D011209 4.2e-11 71.2 95 47.4
Manes.05G178800 Manihot esculenta HOM05D012738 ORTHO05D011209 7.2e-11 70.5 82 53.7
Eucgr.F00145 Eucalyptus grandis HOM05D012398 ORTHO05D011209 1.0e-09 66.6 80 50.0
Nn5g30445 Nelumbo nucifera HOM05D012738 ORTHO05D011209 1.0e-09 66.6 97 45.4
Gohir.D05G210150 Gossypium hirsutum HOM05D012398 ORTHO05D011209 1.4e-09 66.2 78 52.6
Glyma.17G237400 Glycine max HOM05D012738 ORTHO05D011209 2.3e-09 65.5 86 44.2
Lalb_Chr14g0368431 Lupinus albus HOM05D012738 ORTHO05D011209 5.7e-08 60.8 92 39.1
Glyma.14G087000 Glycine max HOM05D012738 ORTHO05D011209 7.5e-08 60.5 86 45.3
Lalb_Chr22g0354831 Lupinus albus HOM05D012738 ORTHO05D011209 1.3e-07 59.7 77 46.8
RcHm_v2.0_Chr6g0308941 Rosa chinensis HOM05D019937 ORTHO05D011209 1.7e-07 59.3 82 46.3
FAN27G0461 Fragaria x ananassa HOM05D019937 ORTHO05D011209 1.8e-06 55.8 80 40.0
FvH4_2g33550 Fragaria vesca HOM05D019937 ORTHO05D011209 2.4e-06 55.5 81 39.5
FAN24G1174 Fragaria x ananassa HOM05D019937 ORTHO05D011209 2.4e-06 55.5 81 39.5
Prupe.1G428300 Prunus persica HOM05D019937 ORTHO05D011209 3.1e-06 55.1 27 92.6
Gohir.D06G019660 Gossypium hirsutum HOM05D012398 ORTHO05D011209 5.4e-06 54.3 33 78.8
Lj5g0013662 Lotus japonicus HOM05D012738 ORTHO05D011209 7.0e-06 53.9 90 38.9
FAN20G2792 Fragaria x ananassa HOM05D019937 ORTHO05D011209 9.2e-06 53.5 81 38.3
Lsat_1_v5_gn_4_130040 Lactuca sativa HOM05D057471 ORTHO05D011209 9.2e-06 53.5 75 44.0
Sc02g0007610 Simmondsia chinensis HOM05D012398 ORTHO05D011209 9.2e-06 53.5 75 40.0


User provided reference genes

Program Settings