Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 4.7e-70 267.7 130 100.0
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 2.6e-68 261.9 130 97.7
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 2.6e-68 261.9 130 97.7
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 1.7e-67 259.2 130 96.2
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.8e-67 258.5 128 96.9
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.3e-64 249.6 130 93.1
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 4.2e-63 244.6 130 88.5
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 7.2e-63 243.8 127 92.9
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 2.1e-62 242.3 130 87.7
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 8.0e-62 240.4 130 89.2
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 8.0e-62 240.4 130 87.7
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 1.0e-61 240.0 130 86.2
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 1.0e-61 240.0 128 88.3
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 1.8e-61 239.2 130 89.2
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.8e-61 239.2 130 87.7
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 1.8e-61 239.2 130 86.9
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 4.0e-61 238.0 130 86.2
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 4.0e-61 238.0 130 86.2
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 6.8e-61 237.3 130 88.5
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 3.4e-60 235.0 130 86.2
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 4.4e-60 234.6 130 86.2
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 5.7e-60 234.2 122 90.2
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 7.5e-60 233.8 130 84.6
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 9.8e-60 233.4 130 85.4
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 9.8e-60 233.4 130 83.1
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 1.7e-59 232.6 130 86.2
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 3.7e-59 231.5 130 83.1
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 8.3e-59 230.3 125 87.2
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 8.3e-59 230.3 122 91.0
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.1e-58 229.9 129 85.3
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.1e-58 229.9 122 89.3
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 1.4e-58 229.6 127 86.6
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 1.4e-58 229.6 129 85.3
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 1.8e-58 229.2 127 85.0
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 1.8e-58 229.2 132 84.8
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 2.4e-58 228.8 121 89.3
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.1e-58 228.4 119 93.3
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 5.4e-58 227.6 122 88.5
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 5.4e-58 227.6 130 83.1
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 9.1e-58 226.9 129 82.9
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.6e-57 226.1 130 83.1
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 2.0e-57 225.7 129 82.9
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 2.0e-57 225.7 129 82.2
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.7e-57 225.3 129 84.5
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 2.7e-57 225.3 121 88.4
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 4.5e-57 224.6 129 80.6
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 5.9e-57 224.2 130 81.5
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 7.7e-57 223.8 122 84.4
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 7.7e-57 223.8 130 82.3
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 1.0e-56 223.4 140 79.3
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.3e-56 223.0 127 83.5
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 1.3e-56 223.0 130 82.3
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 1.3e-56 223.0 122 86.1
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 1.3e-56 223.0 129 80.6
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 1.7e-56 222.6 121 84.3
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.7e-56 222.6 124 86.3
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 1.7e-56 222.6 129 81.4
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 5.0e-56 221.1 121 85.1
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.1e-55 219.9 130 80.8
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 1.1e-55 219.9 119 87.4
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 1.1e-55 219.9 123 84.6
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.9e-55 219.2 130 80.8
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 1.9e-55 219.2 126 82.5
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 2.5e-55 218.8 130 80.8
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 3.3e-55 218.4 130 80.8
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 3.3e-55 218.4 130 80.8
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 3.3e-55 218.4 166 68.1
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 4.2e-55 218.0 127 80.3
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 5.5e-55 217.6 122 83.6
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 5.5e-55 217.6 124 81.5
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 7.2e-55 217.2 127 81.1
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 7.2e-55 217.2 127 80.3
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 7.2e-55 217.2 126 80.2
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 7.2e-55 217.2 127 80.3
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 7.2e-55 217.2 127 80.3
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 9.5e-55 216.9 130 76.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 1.2e-54 216.5 130 80.0
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 1.2e-54 216.5 130 80.0
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 2.1e-54 215.7 124 80.6
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 4.7e-54 214.5 127 80.3
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 4.7e-54 214.5 125 87.2
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 6.1e-54 214.2 127 78.7
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 1.4e-53 213.0 122 82.0
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 1.8e-53 212.6 130 78.5
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 5.2e-53 211.1 133 78.2
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 5.2e-53 211.1 107 96.3
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 8.9e-53 210.3 127 78.0
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 3.4e-52 208.4 120 81.7
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 3.4e-52 208.4 120 81.7
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 4.4e-52 208.0 129 79.1
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 1.4e-50 203.0 108 89.8
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 1.4e-50 203.0 107 91.6
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 4.1e-50 201.4 132 74.2
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 4.1e-50 201.4 111 86.5
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 9.2e-50 200.3 108 88.9
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 2.0e-49 199.1 128 76.6
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 2.0e-49 199.1 165 63.0
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.0e-49 199.1 118 82.2
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 5.9e-49 197.6 112 85.7
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 7.8e-49 197.2 108 87.0
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 7.8e-49 197.2 111 86.5
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 2.9e-48 195.3 108 87.0
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 1.5e-47 193.0 107 86.0
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 8.0e-46 187.2 109 85.3
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.2e-44 183.3 119 72.3
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 1.7e-43 179.5 107 81.3
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 1.7e-43 179.5 121 72.7
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 5.4e-42 174.5 118 67.8
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.6e-41 172.9 112 75.9
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 2.0e-41 172.6 99 85.9
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 5.2e-37 157.9 93 78.5
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 6.8e-37 157.5 92 80.4
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 7.8e-33 144.1 116 58.6
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 4.7e-30 134.8 120 55.8
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 4.7e-30 134.8 120 55.8
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 6.2e-30 134.4 120 55.0
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 8.9e-29 130.6 120 55.0
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 2.0e-28 129.4 119 52.1
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 7.5e-28 127.5 75 84.0
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 2.3e-24 115.9 108 54.6
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.1e-23 113.6 88 59.1
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 3.1e-21 105.5 119 42.9
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 4.0e-21 105.1 119 41.2


User provided reference genes

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