Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 3.4e-18 94.0 48 100.0
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 5.6e-13 76.6 49 85.7
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 6.2e-12 73.2 49 79.6
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 1.4e-11 72.0 49 79.6
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.8e-11 71.6 44 79.5
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 5.3e-11 70.1 47 74.5
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 6.9e-11 69.7 45 77.8
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 1.5e-10 68.6 49 77.6
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 2.6e-10 67.8 48 68.8
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 2.6e-10 67.8 48 68.8
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 3.4e-10 67.4 41 80.5
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 5.8e-10 66.6 43 74.4
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 2.2e-09 64.7 51 68.6
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 2.9e-09 64.3 40 80.0
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 6.5e-09 63.2 52 65.4
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 8.4e-09 62.8 43 67.4
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 8.4e-09 62.8 38 78.9
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 1.1e-08 62.4 47 74.5
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 1.1e-08 62.4 48 66.7
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 2.5e-08 61.2 48 68.8
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 9.3e-08 59.3 41 65.9
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 9.3e-08 59.3 41 65.9
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 9.3e-08 59.3 39 69.2
COL.COLO4_07461 Corchorus olitorius HOM05D009126 ORTHO05D011285 1.2e-07 58.9 37 78.4
Lalb_Chr12g0209641 Lupinus albus HOM05D009126 ORTHO05D011285 1.6e-07 58.5 42 69.0
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 2.1e-07 58.2 45 60.0
Oeu035754.1 Olea europaea HOM05D009126 ORTHO05D011285 3.5e-07 57.4 47 55.3
Potri.005G255701 Populus trichocarpa HOM05D009126 ORTHO05D011285 4.6e-07 57.0 45 62.2
Oeu035861.2 Olea europaea HOM05D009126 ORTHO05D011285 6.0e-07 56.6 47 53.2
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 7.9e-07 56.2 39 66.7
TAR625G1075 Trochodendron aralioides HOM05D009126 ORTHO05D011285 1.8e-06 55.1 43 67.4
TAR381G1079 Trochodendron aralioides HOM05D009126 ORTHO05D011285 3.9e-06 53.9 43 62.8
unitig_21.g20582 Utricularia gibba HOM05D009126 ORTHO05D011285 6.7e-06 53.1 45 53.3


User provided reference genes

Program Settings