Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.8e-70 267.7 134 100.0
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 4.1e-61 238.0 134 90.3
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.2e-58 228.0 134 86.6
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 2.1e-57 225.7 131 81.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.7e-57 225.3 134 85.8
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.0e-56 223.4 134 84.3
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 4.4e-55 218.0 131 80.9
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 9.8e-55 216.9 133 79.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.7e-54 216.1 130 80.0
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 3.7e-54 214.9 132 77.3
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 6.3e-54 214.2 136 77.2
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.4e-53 213.0 122 83.6
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-53 213.0 132 77.3
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.8e-53 212.6 130 79.2
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 3.1e-53 211.8 132 80.3
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 5.4e-53 211.1 132 77.3
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 7.0e-53 210.7 122 82.0
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.6e-52 209.5 127 78.7
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 3.5e-52 208.4 134 76.1
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 5.9e-52 207.6 133 76.7
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 7.7e-52 207.2 136 77.2
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.3e-51 206.5 138 74.6
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.7e-51 206.1 132 74.2
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.7e-51 206.1 136 74.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 3.8e-51 204.9 125 76.0
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.8e-51 204.9 131 74.8
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.8e-51 204.9 131 74.8
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 8.5e-51 203.8 136 74.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 8.5e-51 203.8 136 76.5
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 8.5e-51 203.8 133 75.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.1e-50 203.4 132 77.3
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.1e-50 203.4 131 76.3
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.9e-50 202.6 132 75.0
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 5.5e-50 201.1 131 76.3
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 5.5e-50 201.1 134 73.9
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 7.2e-50 200.7 132 76.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 7.2e-50 200.7 132 75.8
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 9.4e-50 200.3 132 77.3
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.2e-49 199.9 132 72.7
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.2e-49 199.9 121 80.2
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.6e-49 199.5 136 75.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.6e-49 199.5 133 69.9
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 2.1e-49 199.1 137 74.5
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 2.1e-49 199.1 132 73.5
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.1e-49 199.1 122 75.4
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 3.6e-49 198.4 132 75.8
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.7e-49 198.0 134 76.1
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 4.7e-49 198.0 132 75.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.1e-49 197.6 121 79.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 6.1e-49 197.6 132 75.0
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.0e-48 196.8 121 77.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.0e-48 196.8 121 76.9
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.8e-48 196.1 131 71.0
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.3e-48 195.7 133 71.4
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.0e-48 194.9 121 80.2
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 4.0e-48 194.9 134 72.4
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 8.8e-48 193.7 121 79.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.2e-47 193.4 132 68.9
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.2e-47 193.4 122 77.9
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.5e-47 193.0 133 70.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 2.6e-47 192.2 136 74.3
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 5.7e-47 191.0 131 71.8
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 7.5e-47 190.7 131 70.2
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 2.8e-46 188.7 116 81.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 3.7e-46 188.3 127 70.1
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 4.9e-46 188.0 132 70.5
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.1e-45 186.8 139 69.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.4e-45 186.4 128 69.5
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.8e-45 186.0 139 69.8
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 3.1e-45 185.3 137 67.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.0e-44 182.6 129 72.1
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 3.5e-44 181.8 134 67.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 3.8e-43 178.3 134 66.4
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.9e-42 176.0 119 70.6
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.5e-42 175.6 135 65.2
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 5.6e-42 174.5 134 69.4
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 5.6e-42 174.5 134 69.4
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 9.5e-42 173.7 136 68.4
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.2e-41 173.3 119 68.9
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.6e-41 172.9 119 68.9
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.6e-41 172.9 119 68.9
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.6e-41 172.9 119 68.9
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 2.1e-41 172.6 119 68.9
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 3.6e-41 171.8 119 68.1
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 3.6e-41 171.8 119 68.1
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 4.7e-41 171.4 119 68.1
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.0e-40 170.2 89 93.3
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 6.8e-40 167.5 119 68.1
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.0e-39 166.0 193 47.2
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.4e-39 164.9 136 61.8
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 4.9e-38 161.4 135 60.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.2e-36 156.8 128 59.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 4.7e-33 144.8 81 81.5
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 8.9e-32 140.6 101 72.3
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.5e-31 137.5 109 58.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 2.7e-28 129.0 136 50.0
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.9e-26 122.9 80 70.0
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.1e-25 119.4 144 47.9
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.2e-25 117.9 79 73.4
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 2.6e-23 112.5 145 44.8
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.5e-23 110.9 70 75.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 8.3e-22 107.5 119 49.6
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.9e-21 106.3 126 48.4
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.1e-18 97.1 122 44.3
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 2.1e-12 76.3 118 38.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 3.3e-10 68.9 119 33.6
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 6.2e-09 64.7 79 45.6
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 6.2e-09 64.7 79 46.8
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.4e-08 63.5 49 61.2
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 2.4e-08 62.8 40 72.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.4e-07 58.9 127 34.6
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 2.9e-06 55.8 36 69.4


User provided reference genes

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