Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 3.6e-52 208.0 106 100.0
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 6.8e-43 177.2 105 83.8
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 5.7e-42 174.1 105 82.9
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 1.3e-41 172.9 105 82.9
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 5.4e-40 167.5 105 79.0
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 6.6e-38 160.6 105 76.2
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 4.3e-37 157.9 106 76.4
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 5.6e-37 157.5 101 77.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 2.8e-36 155.2 104 73.1
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 1.8e-35 152.5 106 73.6
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 6.8e-35 150.6 100 75.0
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 6.8e-35 150.6 107 73.8
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 8.9e-35 150.2 102 73.5
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 2.6e-34 148.7 107 72.0
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 4.4e-34 147.9 104 69.2
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 5.7e-34 147.5 106 72.6
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 1.7e-33 146.0 104 70.2
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 1.7e-33 146.0 104 70.2
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 1.7e-33 146.0 104 73.1
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 4.9e-33 144.4 101 70.3
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.1e-32 143.3 108 69.4
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 1.4e-32 142.9 102 70.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 9.2e-32 140.2 105 64.8
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 2.7e-31 138.7 94 72.3
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 3.5e-31 138.3 92 71.7
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 4.6e-31 137.9 105 69.5
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 5.9e-31 137.5 106 69.8
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 7.8e-31 137.1 103 68.0
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 7.8e-31 137.1 107 66.4
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 2.3e-30 135.6 105 66.7
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 3.0e-30 135.2 106 67.9
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 3.9e-30 134.8 106 64.2
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 8.6e-30 133.7 105 65.7
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 8.6e-30 133.7 105 64.8
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 1.1e-29 133.3 106 67.9
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.5e-29 132.9 103 68.9
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 1.9e-29 132.5 106 67.0
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.5e-29 132.1 105 65.7
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 4.3e-29 131.3 105 64.8
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 4.3e-29 131.3 108 63.0
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 4.3e-29 131.3 110 62.7
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 4.3e-29 131.3 103 67.0
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 5.6e-29 131.0 101 65.3
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 5.6e-29 131.0 109 62.4
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 5.6e-29 131.0 106 61.3
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 9.5e-29 130.2 103 62.1
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 1.2e-28 129.8 93 68.8
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 1.2e-28 129.8 101 63.4
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 1.2e-28 129.8 92 69.6
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 1.6e-28 129.4 103 65.0
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 1.6e-28 129.4 103 65.0
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 2.1e-28 129.0 101 63.4
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 2.8e-28 128.6 101 64.4
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 3.6e-28 128.3 101 64.4
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 3.6e-28 128.3 100 65.0
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 6.2e-28 127.5 101 63.4
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 6.2e-28 127.5 103 64.1
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 8.0e-28 127.1 102 61.8
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 8.0e-28 127.1 104 64.4
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 1.4e-27 126.3 106 61.3
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 1.8e-27 125.9 104 61.5
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 1.8e-27 125.9 104 61.5
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 2.3e-27 125.6 88 65.9
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 3.1e-27 125.2 108 63.0
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 4.0e-27 124.8 101 62.4
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 4.0e-27 124.8 89 70.8
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 4.0e-27 124.8 113 58.4
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 5.2e-27 124.4 101 62.4
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 1.2e-26 123.2 112 60.7
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 1.2e-26 123.2 108 62.0
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 2.0e-26 122.5 105 58.1
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 2.0e-26 122.5 110 61.8
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 2.0e-26 122.5 110 61.8
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 2.0e-26 122.5 103 60.2
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 2.6e-26 122.1 105 63.8
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 2.6e-26 122.1 104 60.6
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 4.4e-26 121.3 107 57.0
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 7.5e-26 120.6 85 70.6
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 9.8e-26 120.2 105 57.1
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 9.8e-26 120.2 101 59.4
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 9.8e-26 120.2 106 58.5
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 9.8e-26 120.2 112 57.1
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 1.3e-25 119.8 101 60.4
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 1.7e-25 119.4 105 59.0
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.4e-24 116.3 81 70.4
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 2.4e-24 115.5 106 57.5
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 3.2e-24 115.2 105 58.1
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 9.2e-24 113.6 94 59.6
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 1.6e-23 112.8 105 52.4
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 1.6e-23 112.8 100 60.0
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 2.7e-23 112.1 91 60.4
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 1.0e-22 110.2 108 50.9
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 1.3e-22 109.8 87 58.6
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 1.9e-21 105.9 87 57.5
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 2.6e-18 95.5 87 57.5
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 2.3e-14 82.4 84 44.0
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 1.5e-13 79.7 87 42.5
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 1.6e-12 76.3 71 56.3
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.6e-12 76.3 71 56.3
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 1.8e-11 72.8 87 42.5
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 2.3e-11 72.4 53 67.9


User provided reference genes

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