Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 7.7e-46 186.8 95 100.0
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.5e-38 162.5 89 91.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.2e-37 158.7 95 83.2
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.9e-36 155.6 89 86.5
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.2e-35 152.9 91 82.4
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.3e-33 144.8 89 82.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 7.4e-33 143.7 87 83.9
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 9.7e-33 143.3 89 79.8
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 9.7e-33 143.3 89 80.9
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.2e-32 142.1 89 80.9
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 2.8e-32 141.7 89 83.1
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 8.2e-32 140.2 84 81.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.8e-31 139.0 89 76.4
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.4e-31 138.7 84 79.8
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 5.3e-31 137.5 87 77.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 7.0e-31 137.1 87 77.0
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 9.1e-31 136.7 90 73.3
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 9.1e-31 136.7 89 76.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.6e-30 136.0 89 76.4
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 2.0e-30 135.6 89 76.4
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 2.0e-30 135.6 89 74.2
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 2.6e-30 135.2 82 81.7
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.5e-30 134.8 89 76.4
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 4.5e-30 134.4 94 69.1
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 4.5e-30 134.4 89 73.0
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.0e-29 133.3 86 80.2
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.3e-29 132.9 89 71.9
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.3e-29 132.9 89 71.9
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.2e-29 132.1 90 72.2
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 2.2e-29 132.1 85 75.3
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.2e-29 132.1 89 78.7
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 2.2e-29 132.1 89 78.7
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.2e-29 132.1 89 71.9
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 2.2e-29 132.1 87 77.0
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.9e-29 131.7 86 75.6
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.8e-29 131.3 85 75.3
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 5.0e-29 131.0 85 77.6
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 5.0e-29 131.0 87 73.6
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 8.5e-29 130.2 89 71.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.5e-28 129.4 83 78.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.5e-28 129.4 85 72.9
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.5e-28 129.4 89 75.3
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.9e-28 129.0 84 76.2
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 1.9e-28 129.0 83 77.1
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.5e-28 128.6 87 73.6
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.5e-28 128.6 80 80.0
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 3.2e-28 128.3 85 74.1
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.2e-28 128.3 85 72.9
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 4.2e-28 127.9 83 78.3
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 4.2e-28 127.9 89 75.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 5.5e-28 127.5 89 73.0
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 5.5e-28 127.5 86 73.3
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 7.2e-28 127.1 88 77.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 7.2e-28 127.1 90 73.3
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 7.2e-28 127.1 89 76.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 7.2e-28 127.1 83 75.9
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 7.2e-28 127.1 80 77.5
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 7.2e-28 127.1 80 77.5
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 7.2e-28 127.1 80 78.8
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 7.2e-28 127.1 80 78.8
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.4e-28 126.7 83 74.7
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 9.4e-28 126.7 85 71.8
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 1.2e-27 126.3 83 75.9
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.2e-27 126.3 89 71.9
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.2e-27 126.3 89 74.2
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.6e-27 125.9 89 70.8
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 2.7e-27 125.2 85 71.8
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.7e-27 125.2 88 76.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 2.7e-27 125.2 85 72.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.7e-27 125.2 89 70.8
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.6e-27 124.8 86 70.9
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 3.6e-27 124.8 79 75.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 6.1e-27 124.0 89 69.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 8.0e-27 123.6 85 71.8
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 8.0e-27 123.6 84 73.8
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 8.0e-27 123.6 82 74.4
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.0e-26 123.2 80 77.5
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.0e-26 123.2 79 75.9
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.4e-26 122.9 82 73.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 1.8e-26 122.5 89 73.0
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 2.3e-26 122.1 83 71.1
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.3e-26 122.1 89 73.0
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 2.3e-26 122.1 87 69.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 4.0e-26 121.3 81 76.5
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 6.7e-26 120.6 86 72.1
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 6.7e-26 120.6 79 75.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 8.8e-26 120.2 84 73.8
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.6e-25 118.6 87 66.7
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 2.6e-25 118.6 89 68.5
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 3.3e-25 118.2 89 66.3
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 4.4e-25 117.9 82 70.7
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 7.5e-25 117.1 87 67.8
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.3e-24 116.3 84 73.8
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 1.4e-23 112.8 81 72.8
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.8e-23 112.5 83 75.9
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.2e-21 105.5 81 67.9
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.6e-19 99.4 57 86.0
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.7e-19 98.6 104 53.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.8e-16 88.6 53 77.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 8.3e-16 87.0 59 67.8
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 2.4e-15 85.5 89 56.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.6e-14 82.8 62 67.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.6e-14 82.8 52 75.0
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.6e-13 77.0 59 67.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 8.6e-13 77.0 87 52.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.5e-12 76.3 57 73.7
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 5.5e-12 74.3 42 83.3
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.0e-10 70.1 42 76.2
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 5.7e-09 64.3 84 54.8
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 4.9e-08 61.2 36 86.1
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 3.5e-06 55.1 40 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 7.8e-06 53.9 53 49.1


User provided reference genes

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