Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 0.0e+00 1310.8 733 100.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 4.7e-292 1007.7 740 77.7
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.3e-262 909.1 747 72.8
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 5.0e-262 907.9 747 73.0
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 9.8e-258 893.6 748 71.0
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 2.3e-230 802.7 618 75.4
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.9e-160 570.5 811 48.8
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.9e-160 570.5 663 55.8
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.0e-158 564.7 814 48.5
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 5.0e-153 545.8 772 50.0
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.2e-149 534.6 773 50.6
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 8.3e-148 528.5 843 46.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 2.7e-146 523.5 873 45.7
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 5.6e-144 515.8 773 46.6
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.8e-143 513.5 763 47.2
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 5.4e-139 499.2 782 46.9
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 3.5e-138 496.5 759 47.6
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.2e-133 481.5 627 50.4
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 6.6e-129 465.7 753 45.8
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 5.6e-128 462.6 782 46.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 7.3e-128 462.2 786 44.7
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 3.2e-123 446.8 788 45.3
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 2.1e-122 444.1 852 43.2
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 2.7e-122 443.7 815 44.4
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 2.3e-121 440.7 788 42.8
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 6.6e-121 439.1 756 44.0
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 1.6e-119 434.5 737 44.1
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 2.1e-119 434.1 757 46.2
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.7e-116 424.5 805 42.1
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.1e-115 421.8 749 45.5
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 3.9e-113 413.3 701 45.5
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 5.1e-113 412.9 755 42.8
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.9e-112 411.0 811 44.3
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 2.4e-110 404.1 757 43.3
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.2e-108 397.5 757 42.9
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 6.4e-108 396.0 743 42.5
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 6.4e-108 396.0 781 44.2
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 3.2e-107 393.7 798 42.7
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 3.2e-107 393.7 718 43.9
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 3.2e-107 393.7 749 43.0
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 2.1e-106 391.0 781 44.0
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.5e-106 390.2 784 42.5
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.0e-105 387.1 676 42.5
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.5e-104 384.8 715 42.4
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 6.2e-103 379.4 670 41.8
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 3.1e-102 377.1 785 42.2
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 5.3e-102 376.3 743 41.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.6e-101 374.0 808 39.9
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 3.4e-101 373.6 782 42.2
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 4.5e-101 373.2 762 40.4
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.1e-99 368.6 810 39.3
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 5.4e-99 366.3 820 39.6
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 4.6e-98 363.2 788 38.8
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.8e-97 361.3 782 39.1
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 3.0e-97 360.5 577 46.6
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 6.2e-95 352.8 786 40.8
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.1e-94 352.1 767 41.7
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 3.4e-93 347.1 827 39.5
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 9.9e-93 345.5 595 45.7
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.3e-92 345.1 803 39.1
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.7e-92 344.7 795 40.5
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 8.4e-92 342.4 826 37.3
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 8.4e-92 342.4 768 38.9
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.1e-90 337.8 779 40.3
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.5e-88 331.6 728 38.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 2.5e-88 330.9 772 37.2
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 4.3e-88 330.1 761 38.2
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 3.1e-86 323.9 748 39.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.2e-85 322.0 528 47.0
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 3.4e-85 320.5 591 44.2
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 7.6e-85 319.3 662 40.6
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.3e-84 318.5 773 37.1
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.9e-83 314.7 651 40.7
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.2e-82 312.0 693 37.2
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.1e-81 306.6 546 43.4
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.1e-81 306.6 546 43.4
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 8.7e-81 305.8 626 43.5
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 6.9e-78 296.2 804 38.7
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 6.9e-78 296.2 811 37.2
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 4.2e-75 287.0 818 37.2
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 2.1e-74 284.6 807 36.3
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 2.7e-74 284.3 879 34.0
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 4.6e-74 283.5 774 38.2
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 6.7e-73 279.6 593 42.2
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 5.7e-72 276.6 824 36.7
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 7.4e-72 276.2 597 42.0
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 2.8e-71 274.2 598 39.3
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.1e-70 270.8 724 38.0
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.1e-66 258.1 294 57.1
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.7e-66 257.7 599 40.7
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.7e-66 257.7 599 40.7
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 6.7e-65 253.1 637 39.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 8.8e-65 252.7 669 38.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 2.6e-64 251.1 683 34.1
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.9e-59 235.0 525 43.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 3.7e-55 220.7 691 35.2
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 2.9e-52 211.1 779 30.6
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 6.5e-52 209.9 631 34.2
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.5e-51 208.8 610 35.1
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.2e-50 205.7 713 32.3
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.7e-50 203.8 752 31.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 4.7e-50 203.8 731 32.7
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.4e-49 202.2 746 31.6
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 6.7e-49 199.9 800 31.1
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 9.1e-38 162.9 198 49.0
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.1e-34 151.8 614 30.9
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 2.8e-31 141.4 406 35.7
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.3e-28 132.5 481 32.4
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 1.2e-16 92.8 702 26.8
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 7.0e-14 83.6 720 26.4
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.5e-11 75.9 152 37.5
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.5e-11 75.1 181 33.1
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.0e-09 67.8 815 25.5
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.0e-09 67.8 815 25.5
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 3.4e-08 64.7 151 34.4
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 2.9e-07 61.6 256 32.8
AagrBONN_evm.TU.Sc2ySwM_362.1405 Anthoceros agrestis HOM05D051179 ORTHO05D038399 7.1e-06 57.0 67 53.7


User provided reference genes

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