Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 7.3e-42 173.7 103 100.0
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 8.9e-24 113.6 112 54.5
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 2.0e-23 112.5 111 73.9
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 7.6e-23 110.5 112 54.5
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 2.9e-22 108.6 113 54.0
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 3.6e-17 91.7 73 63.0
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 3.1e-16 88.6 69 62.3
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 2.6e-15 85.5 69 59.4
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 5.8e-15 84.3 70 62.9
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 2.9e-14 82.0 68 63.2
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 3.8e-14 81.6 74 52.7
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 5.4e-13 77.8 73 47.9
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 5.4e-13 77.8 73 47.9
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 5.4e-13 77.8 75 50.7
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 5.4e-13 77.8 73 56.2
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 7.1e-13 77.4 70 57.1
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 9.3e-13 77.0 74 55.4
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 1.2e-12 76.6 70 57.1
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.6e-12 76.3 68 51.5
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 2.1e-12 75.9 76 48.7
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 2.1e-12 75.9 75 49.3
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 2.1e-12 75.9 70 55.7
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 2.7e-12 75.5 68 57.4
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 3.5e-12 75.1 71 56.3
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 4.6e-12 74.7 77 54.5
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 6.0e-12 74.3 78 53.8
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 7.8e-12 73.9 73 54.8
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.3e-11 73.2 70 58.6
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 5.1e-11 71.2 68 52.9
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 6.6e-11 70.9 77 53.2
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 6.6e-11 70.9 68 54.4
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 1.5e-10 69.7 69 55.1
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 1.9e-10 69.3 75 52.0
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 1.9e-10 69.3 68 52.9
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 1.9e-10 69.3 70 57.1
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 2.5e-10 68.9 68 52.9
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 4.3e-10 68.2 68 48.5
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 5.6e-10 67.8 70 52.9
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 9.6e-10 67.0 76 50.0
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 1.6e-09 66.2 56 55.4
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.8e-09 65.5 74 41.9
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.8e-09 65.5 74 41.9
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 2.8e-09 65.5 72 45.8
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 3.6e-09 65.1 78 47.4
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 6.2e-09 64.3 76 50.0
Migut.N02682 Erythranthe guttata HOM05D008210 ORTHO05D010078 1.4e-08 63.2 45 64.4
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 5.3e-08 61.2 54 51.9
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 5.3e-08 61.2 72 44.4
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 9.0e-08 60.5 77 40.3
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 1.5e-07 59.7 81 46.9
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 1.5e-07 59.7 68 48.5
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 2.6e-07 58.9 72 50.0
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 3.4e-07 58.5 68 50.0
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 4.5e-07 58.2 68 47.1
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 5.8e-07 57.8 74 45.9
MELO3C010908.2 Cucumis melo HOM05D022138 ORTHO05D010078 5.8e-07 57.8 72 45.8
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 5.8e-07 57.8 80 42.5
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 7.6e-07 57.4 73 46.6
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 9.9e-07 57.0 68 48.5
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 9.9e-07 57.0 74 45.9
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 1.3e-06 56.6 75 45.3
Nn4g22836 Nelumbo nucifera HOM05D008210 ORTHO05D010078 1.3e-06 56.6 63 41.3
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 2.9e-06 55.5 70 42.9
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 2.9e-06 55.5 70 45.7
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 6.4e-06 54.3 76 42.1
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 6.4e-06 54.3 52 51.9
HPP92_007123 Vanilla planifolia HOM05D008210 ORTHO05D010078 6.4e-06 54.3 78 38.5
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 8.4e-06 53.9 75 42.7
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 8.4e-06 53.9 75 42.7
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 8.4e-06 53.9 70 41.4


User provided reference genes

Program Settings