Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G013200 Theobroma cacao HOM05D011848 ORTHO05D012195 2.4e-51 205.3 108 100.0
Thecc.08G013000 Theobroma cacao HOM05D011848 ORTHO05D012195 7.4e-45 183.7 108 90.7
COL.COLO4_26460 Corchorus olitorius HOM05D011848 ORTHO05D012195 6.7e-30 134.0 111 69.4
Gohir.A03G088000 Gossypium hirsutum HOM05D011848 ORTHO05D012195 2.1e-15 85.9 108 50.0
Gorai.005G104300 Gossypium raimondii HOM05D011848 ORTHO05D012195 6.1e-15 84.3 108 50.0
Gohir.D02G092700 Gossypium hirsutum HOM05D011848 ORTHO05D012195 3.9e-14 81.6 108 47.2
Gorai.009G209800 Gossypium raimondii HOM05D011848 ORTHO05D012195 1.5e-13 79.7 108 49.1
Gohir.A05G200500 Gossypium hirsutum HOM05D011848 ORTHO05D012195 6.3e-12 74.3 108 45.4
Gorai.010G017400 Gossypium raimondii HOM05D011848 ORTHO05D012195 2.4e-11 72.4 108 44.4
Gohir.D06G014650 Gossypium hirsutum HOM05D011848 ORTHO05D012195 3.1e-11 72.0 108 44.4
Haze_17565 Corylus avellana HOM05D016981 ORTHO05D016155 1.6e-10 69.7 107 46.7
Cfa018510 Carpinus fangiana HOM05D016981 ORTHO05D016155 7.7e-10 67.4 107 43.9
TWI56G0101 Tripterygium wilfordii HOM05D011848 ORTHO05D012195 5.5e-08 61.2 106 44.3
Gohir.A05G261300 Gossypium hirsutum HOM05D037164 ORTHO05D012195 9.4e-08 60.5 98 50.0
COL.COLO4_26459 Corchorus olitorius HOM05D024293 ORTHO05D012195 1.6e-07 59.7 100 47.0
Gohir.D05G203750 Gossypium hirsutum HOM05D011848 ORTHO05D012195 2.7e-07 58.9 108 43.5
Manes.18G033800 Manihot esculenta HOM05D011848 ORTHO05D012195 3.6e-07 58.5 103 44.7
Gohir.D05G263400 Gossypium hirsutum HOM05D037164 ORTHO05D012195 1.8e-06 56.2 98 49.0
Gorai.009G275300 Gossypium raimondii HOM05D037164 ORTHO05D012195 1.8e-06 56.2 98 49.0
QL02p005823 Quercus lobata HOM05D016981 ORTHO05D016155 3.0e-06 55.5 107 41.1
Gohir.A06G016500 Gossypium hirsutum HOM05D011848 ORTHO05D012195 4.0e-06 55.1 32 78.1
Gorai.009G209700 Gossypium raimondii HOM05D024293 ORTHO05D036102 6.7e-06 54.3 102 40.2
Migut.N02694 Erythranthe guttata HOM05D011848 ORTHO05D012195 8.8e-06 53.9 105 39.0


User provided reference genes

Program Settings